Gene Shewana3_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0817 
Symbol 
ID4477028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp945076 
End bp945810 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID639725353 
Producthypothetical protein 
Protein accessionYP_868461 
Protein GI117919269 
COG category[S] Function unknown 
COG ID[COG3821] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.875771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCT CGCTATTAGA TATTTCTGCA TTAACGTGGT TTATCGTTTC TTGGGCTGGC 
TATACCGCTT TTGCCCGACG TAAGGCGAAG GATACCGACT GTATTGCCCG TGGCCTGCAT
AAGCACAGGA TCTACTGGAT GCTCGAGCTG ATGACTCGAG GCGTGCGGGT AGGCGATGCG
GCGTTATTAG CTAACCTTGA GCGTAATATT GCCTTTTTTG CTTCGACCAC ACTGTTCGTA
CTGGCGGGGG TATTAACCTT ATTTGCACAG GTTGAACGCC TCGAAGCCGT GATCGCCACT
ATTCCCTATG CTACGCCGCC GAACCACTCT TTAGTTCAAG TTAAGCTGGC GCTATTAGTA
GTAATCTTCG TGATGGCGTT TTTCCAATTT ACCTGGTCGA TGCGCCAATA CGGCTTTGTA
AACGTGATGA TTGGCGCAGG CCCCATGGAT AGCGAAGGCG CCAACGACAA CCTCAAAGCC
TACGCTCGGC AAATGGCGAC AGTGCAAGAT CAAGCCGCCC ATTCCTATAA CTATGGCCTG
CGGGCTTACT ACTTTTCGAT GGCCGTGCTC TGCTGGTTTG TGCACCCGAT ACTGTTTATT
TTGGCCAGCC TATTTGTGGT GGTCACCCTA TATCGCCGCG AATTTAAATC CCGCGCCGTG
ATGGCTATTA CCGCCGCCAA GGCACATTTG GGCAGCGAAT ATCAAGCGCG AGAAGCCCAG
CGCCAAGCCA AGTAG
 
Protein sequence
MTFSLLDISA LTWFIVSWAG YTAFARRKAK DTDCIARGLH KHRIYWMLEL MTRGVRVGDA 
ALLANLERNI AFFASTTLFV LAGVLTLFAQ VERLEAVIAT IPYATPPNHS LVQVKLALLV
VIFVMAFFQF TWSMRQYGFV NVMIGAGPMD SEGANDNLKA YARQMATVQD QAAHSYNYGL
RAYYFSMAVL CWFVHPILFI LASLFVVVTL YRREFKSRAV MAITAAKAHL GSEYQAREAQ
RQAK