Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0817 |
Symbol | |
ID | 4477028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 945076 |
End bp | 945810 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639725353 |
Product | hypothetical protein |
Protein accession | YP_868461 |
Protein GI | 117919269 |
COG category | [S] Function unknown |
COG ID | [COG3821] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.875771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCT CGCTATTAGA TATTTCTGCA TTAACGTGGT TTATCGTTTC TTGGGCTGGC TATACCGCTT TTGCCCGACG TAAGGCGAAG GATACCGACT GTATTGCCCG TGGCCTGCAT AAGCACAGGA TCTACTGGAT GCTCGAGCTG ATGACTCGAG GCGTGCGGGT AGGCGATGCG GCGTTATTAG CTAACCTTGA GCGTAATATT GCCTTTTTTG CTTCGACCAC ACTGTTCGTA CTGGCGGGGG TATTAACCTT ATTTGCACAG GTTGAACGCC TCGAAGCCGT GATCGCCACT ATTCCCTATG CTACGCCGCC GAACCACTCT TTAGTTCAAG TTAAGCTGGC GCTATTAGTA GTAATCTTCG TGATGGCGTT TTTCCAATTT ACCTGGTCGA TGCGCCAATA CGGCTTTGTA AACGTGATGA TTGGCGCAGG CCCCATGGAT AGCGAAGGCG CCAACGACAA CCTCAAAGCC TACGCTCGGC AAATGGCGAC AGTGCAAGAT CAAGCCGCCC ATTCCTATAA CTATGGCCTG CGGGCTTACT ACTTTTCGAT GGCCGTGCTC TGCTGGTTTG TGCACCCGAT ACTGTTTATT TTGGCCAGCC TATTTGTGGT GGTCACCCTA TATCGCCGCG AATTTAAATC CCGCGCCGTG ATGGCTATTA CCGCCGCCAA GGCACATTTG GGCAGCGAAT ATCAAGCGCG AGAAGCCCAG CGCCAAGCCA AGTAG
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Protein sequence | MTFSLLDISA LTWFIVSWAG YTAFARRKAK DTDCIARGLH KHRIYWMLEL MTRGVRVGDA ALLANLERNI AFFASTTLFV LAGVLTLFAQ VERLEAVIAT IPYATPPNHS LVQVKLALLV VIFVMAFFQF TWSMRQYGFV NVMIGAGPMD SEGANDNLKA YARQMATVQD QAAHSYNYGL RAYYFSMAVL CWFVHPILFI LASLFVVVTL YRREFKSRAV MAITAAKAHL GSEYQAREAQ RQAK
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