Gene Shewana3_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0795 
Symbol 
ID4477006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp915498 
End bp916268 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID639725331 
ProductABC-2 type transporter 
Protein accessionYP_868439 
Protein GI117919247 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC TGTATTTTAT CGCCTTTAAA AGCATATTAA CTAAGGAAAT CAATCGTTTT 
ACCCGGATCT GGATCCAGAC CTTAGTCCCG CCAGCAATCA CTATGACCTT GTATTTTTTG
ATTTTTGGTA ACTTGGTCGG TAGCCGCATT GGCGATATGG GGGGCGTATC TTATATGGAG
TTTATTGCGC CTGGTCTAAT CATGATGTCG GTGATTACTA ACTCCTATTC GAATGTGGCG
AGCTCTTTCT ATAGCGCGAA ATTTCAACGC AATCTCGAGG AGTTAATGGT CGCGCCTGTA
CCTCACTATG TGATGATCGC AGGCTATGTG GGTGGCGGTG TCGCACGGGG CTTATGCGTT
GGTTTAATCG TCACGCTAGT CGCCATGTTC TTTGTCGATA TCAGCTTGCA CCATGCAGGC
CTTGTGGTCA TGACGGTATT TTTAACCTCA GTGCTGTTCT CCTTAGGGGG ATTAATTAAC
GCGGTATTTG CCAAGAGTTT CGATGATATC AGCATCATCC CGACGTTTGT GCTCACGCCC
TTAACCTACC TCGGAGGGGT ATTCTATTCA CTGTCGTTGC TGCCATCCTT CTGGCAAGGC
GTTTCTGCAC TGAACCCTGT GGTCTATATG ATCAACGTCT TTCGTTACGG TTTCTTAGGT
TTTGCCGATA TCAGCATTCC GCTTTCTATT GGCATTATGG TGGGCTTTTG CGCCGTACTC
TGGGGTGTTG CTTATTACCT AATCTCGCGG GGAATAGGGC TGCGTTCGTA A
 
Protein sequence
MKQLYFIAFK SILTKEINRF TRIWIQTLVP PAITMTLYFL IFGNLVGSRI GDMGGVSYME 
FIAPGLIMMS VITNSYSNVA SSFYSAKFQR NLEELMVAPV PHYVMIAGYV GGGVARGLCV
GLIVTLVAMF FVDISLHHAG LVVMTVFLTS VLFSLGGLIN AVFAKSFDDI SIIPTFVLTP
LTYLGGVFYS LSLLPSFWQG VSALNPVVYM INVFRYGFLG FADISIPLSI GIMVGFCAVL
WGVAYYLISR GIGLRS