Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0795 |
Symbol | |
ID | 4477006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 915498 |
End bp | 916268 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639725331 |
Product | ABC-2 type transporter |
Protein accession | YP_868439 |
Protein GI | 117919247 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC TGTATTTTAT CGCCTTTAAA AGCATATTAA CTAAGGAAAT CAATCGTTTT ACCCGGATCT GGATCCAGAC CTTAGTCCCG CCAGCAATCA CTATGACCTT GTATTTTTTG ATTTTTGGTA ACTTGGTCGG TAGCCGCATT GGCGATATGG GGGGCGTATC TTATATGGAG TTTATTGCGC CTGGTCTAAT CATGATGTCG GTGATTACTA ACTCCTATTC GAATGTGGCG AGCTCTTTCT ATAGCGCGAA ATTTCAACGC AATCTCGAGG AGTTAATGGT CGCGCCTGTA CCTCACTATG TGATGATCGC AGGCTATGTG GGTGGCGGTG TCGCACGGGG CTTATGCGTT GGTTTAATCG TCACGCTAGT CGCCATGTTC TTTGTCGATA TCAGCTTGCA CCATGCAGGC CTTGTGGTCA TGACGGTATT TTTAACCTCA GTGCTGTTCT CCTTAGGGGG ATTAATTAAC GCGGTATTTG CCAAGAGTTT CGATGATATC AGCATCATCC CGACGTTTGT GCTCACGCCC TTAACCTACC TCGGAGGGGT ATTCTATTCA CTGTCGTTGC TGCCATCCTT CTGGCAAGGC GTTTCTGCAC TGAACCCTGT GGTCTATATG ATCAACGTCT TTCGTTACGG TTTCTTAGGT TTTGCCGATA TCAGCATTCC GCTTTCTATT GGCATTATGG TGGGCTTTTG CGCCGTACTC TGGGGTGTTG CTTATTACCT AATCTCGCGG GGAATAGGGC TGCGTTCGTA A
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Protein sequence | MKQLYFIAFK SILTKEINRF TRIWIQTLVP PAITMTLYFL IFGNLVGSRI GDMGGVSYME FIAPGLIMMS VITNSYSNVA SSFYSAKFQR NLEELMVAPV PHYVMIAGYV GGGVARGLCV GLIVTLVAMF FVDISLHHAG LVVMTVFLTS VLFSLGGLIN AVFAKSFDDI SIIPTFVLTP LTYLGGVFYS LSLLPSFWQG VSALNPVVYM INVFRYGFLG FADISIPLSI GIMVGFCAVL WGVAYYLISR GIGLRS
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