Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0794 |
Symbol | |
ID | 4477005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 914563 |
End bp | 915501 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725330 |
Product | ABC transporter related |
Protein accession | YP_868438 |
Protein GI | 117919246 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATC ATGCCCATGC TCTCGTACTC GAGGGGCTAA AAAAAACCTA CAAAGGCGGC GTTGAGGCGG TAAAGGGGAT TAGCCTTACC GTTGAACAGG GAGACTTTTT TGCATTGCTC GGCCCGAATG GCGCGGGTAA GTCGACCACC ATTGGGATTA TCAGCTCCTT AGTGCAGAAA ACCGCTGGCT CTGTGCAGGT GTTTGATTTT GATATCGATA AGCAGCTCGA GGAAGCCAAG CTGTGCATAG GTTTAGTGCC ACAGGAATTT AACTTCAACC AATTTGAAAC CGTACTGCAA ATTGTAGTGA ACCAAGCCGG TTACTACGGC GTGCCAAAGC ATATTGCCCT TGAGCGTGCT GAAAAATACT TAAGCCAGCT GGATTTGTGG GATAAGCGCA ACAGCCAATC TCGCACCTTG TCGGGCGGGA TGAAGCGGCG ATTAATGATT GCCCGCGCCC TGATGCACGA ACCTAAGTTA CTGATCTTAG ATGAACCAAC GGCGGGGGTC GATATTGAGC TACGCCGCTC AATGTGGGAA TTCCTCAAGC AAATCAACCA ACAGGGCGTG ACTATTATTC TGACTACCCA CTACCTTGAA GAAGCTGAAA TGCTGTGTCG CAATATCGGC ATTATCGATA AGGGCGTGCT GGTGGAGTGT ACGAGCATGA AGGCCTTGCT GAGTAAACTG AATCTCGAAA CCTTTATCCT CGACCTGCGC CGCGACATCG ATGTCGCCCC TACATTGAAT GGTATGGTGT GCCGTTTAAC CGATCCGCAT ACCTTAGAGG TGGATGTGGC GAAGGACCAC AACCTCAATG ATGTGTTTAC GCAACTAACC GCCGCTAAGG TAGAGGTTTT GTCGATGCGT AACAAATCCA ATCGTTTAGA AGAACTCTTC GTCGAGTTAG TAAAGAAAAC CCAAGGAGCT AAGGCATGA
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Protein sequence | MANHAHALVL EGLKKTYKGG VEAVKGISLT VEQGDFFALL GPNGAGKSTT IGIISSLVQK TAGSVQVFDF DIDKQLEEAK LCIGLVPQEF NFNQFETVLQ IVVNQAGYYG VPKHIALERA EKYLSQLDLW DKRNSQSRTL SGGMKRRLMI ARALMHEPKL LILDEPTAGV DIELRRSMWE FLKQINQQGV TIILTTHYLE EAEMLCRNIG IIDKGVLVEC TSMKALLSKL NLETFILDLR RDIDVAPTLN GMVCRLTDPH TLEVDVAKDH NLNDVFTQLT AAKVEVLSMR NKSNRLEELF VELVKKTQGA KA
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