Gene Shewana3_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0794 
Symbol 
ID4477005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp914563 
End bp915501 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content49% 
IMG OID639725330 
ProductABC transporter related 
Protein accessionYP_868438 
Protein GI117919246 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATC ATGCCCATGC TCTCGTACTC GAGGGGCTAA AAAAAACCTA CAAAGGCGGC 
GTTGAGGCGG TAAAGGGGAT TAGCCTTACC GTTGAACAGG GAGACTTTTT TGCATTGCTC
GGCCCGAATG GCGCGGGTAA GTCGACCACC ATTGGGATTA TCAGCTCCTT AGTGCAGAAA
ACCGCTGGCT CTGTGCAGGT GTTTGATTTT GATATCGATA AGCAGCTCGA GGAAGCCAAG
CTGTGCATAG GTTTAGTGCC ACAGGAATTT AACTTCAACC AATTTGAAAC CGTACTGCAA
ATTGTAGTGA ACCAAGCCGG TTACTACGGC GTGCCAAAGC ATATTGCCCT TGAGCGTGCT
GAAAAATACT TAAGCCAGCT GGATTTGTGG GATAAGCGCA ACAGCCAATC TCGCACCTTG
TCGGGCGGGA TGAAGCGGCG ATTAATGATT GCCCGCGCCC TGATGCACGA ACCTAAGTTA
CTGATCTTAG ATGAACCAAC GGCGGGGGTC GATATTGAGC TACGCCGCTC AATGTGGGAA
TTCCTCAAGC AAATCAACCA ACAGGGCGTG ACTATTATTC TGACTACCCA CTACCTTGAA
GAAGCTGAAA TGCTGTGTCG CAATATCGGC ATTATCGATA AGGGCGTGCT GGTGGAGTGT
ACGAGCATGA AGGCCTTGCT GAGTAAACTG AATCTCGAAA CCTTTATCCT CGACCTGCGC
CGCGACATCG ATGTCGCCCC TACATTGAAT GGTATGGTGT GCCGTTTAAC CGATCCGCAT
ACCTTAGAGG TGGATGTGGC GAAGGACCAC AACCTCAATG ATGTGTTTAC GCAACTAACC
GCCGCTAAGG TAGAGGTTTT GTCGATGCGT AACAAATCCA ATCGTTTAGA AGAACTCTTC
GTCGAGTTAG TAAAGAAAAC CCAAGGAGCT AAGGCATGA
 
Protein sequence
MANHAHALVL EGLKKTYKGG VEAVKGISLT VEQGDFFALL GPNGAGKSTT IGIISSLVQK 
TAGSVQVFDF DIDKQLEEAK LCIGLVPQEF NFNQFETVLQ IVVNQAGYYG VPKHIALERA
EKYLSQLDLW DKRNSQSRTL SGGMKRRLMI ARALMHEPKL LILDEPTAGV DIELRRSMWE
FLKQINQQGV TIILTTHYLE EAEMLCRNIG IIDKGVLVEC TSMKALLSKL NLETFILDLR
RDIDVAPTLN GMVCRLTDPH TLEVDVAKDH NLNDVFTQLT AAKVEVLSMR NKSNRLEELF
VELVKKTQGA KA