Gene Shewana3_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0786 
Symbol 
ID4476997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp907230 
End bp907808 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content48% 
IMG OID639725322 
Producthypothetical protein 
Protein accessionYP_868430 
Protein GI117919238 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3056] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCCC CCATGAAAAA GTTATTATTG ACGCTGACTT TCCCCCTGCT CTTCGTGGGC 
TGCGCGAGCC AAAATCCAAC TCATATGGCA TTTAGCCCAC AGGTTCCCGA TATTAGCCAA
CAGACCACCA GACCCGTACA GATCTCATTG GATACCATTG ATACCCGTAA CGTTGAGTAC
GTGGCGCGTT TTATCGAAGA AGGCACTAAG ACTCGCCTCG TCGGCCCGAG TGAGCCACCT
AAATTATTGC TCGATGAAGT TTTCCGTAAC GGTTTTACCC AAGCGGGCTA CCAGATTGAC
CCAAGCGCGA CCAACTCAGT GCAAGTTCAG TTAGAAGAGC TGCAAATGGA TGTCACCAAA
AAGACCTTCG GTTATGAGGC CAAACACAGC GTGCTGATTG CCGTGCAAGC CCGTAATTCC
AGTCAAGAAT TGGTCAAACG CTATAAAGCC AAGGGCACTT TAAAAGGCCC ATTAACGCCA
GACTTTGCCA CTCTAGAGCT GGATATGAAC AAGTTACTCG GCCAACTCAC AGGGGAAATT
TTGAATGACC CTGAGTTAAA CCAGTTCCTG CAACAATAA
 
Protein sequence
MRSPMKKLLL TLTFPLLFVG CASQNPTHMA FSPQVPDISQ QTTRPVQISL DTIDTRNVEY 
VARFIEEGTK TRLVGPSEPP KLLLDEVFRN GFTQAGYQID PSATNSVQVQ LEELQMDVTK
KTFGYEAKHS VLIAVQARNS SQELVKRYKA KGTLKGPLTP DFATLELDMN KLLGQLTGEI
LNDPELNQFL QQ