Gene Shewana3_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0775 
Symbol 
ID4476986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp896881 
End bp897729 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content48% 
IMG OID639725311 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_868419 
Protein GI117919227 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA AAATCATAAA CCTAGGTTCA ATCGAGATCG CTAACGATAA ACCTTTCGTG 
TTGTTTGGTG GCATGAACGT GCTTGAGTCT CGCGATCTCG CTATGTCGAT TGCTGAAACC
TATGCCGAAG TGACGCAAAA ACTGGGTATT CCCTATGTTT TCAAGGCGTC GTTCGACAAG
GCTAACCGCT CTTCTGTTAA CTCTTACCGT GGTCCTGGCA TGGAAGAAGG CTTAAAGATT
TTTGAAGAAA TCAAAAAGAC CTTCAATCTG CCATTGATCA CCGATGTGCA TGAGACTTAC
CAATGTGCGC CTGTCGCTGA AGTGGTTGAT ATTATTCAGC TGCCTGCTTT CTTAGCGCGC
CAAACAGACC TCGTTGTCGC CATGGCGAAA ACGGGCGCTA TCATCAACGT GAAAAAGCCG
CAGTTTTTAG CGCCACACGA AATGCGCCAT ATCATCACTA AGTTTAACGA AGCGGGTAAC
GATGAGATTA TCCTGTGTGA ACGTGGTTCA TGCTTCGGTT ACAACAACCT AGTGGTTGAT
ATGCTGGGTA TGGATGAGAT GAAGCAATCC GGTTATCCGG TGATTTTCGA CGCCACCCAC
GCATTACAAC GTCCTGGTGG TCGTGCCGAT TCGGCGGGCG GCCGTCGTGC TCAAGCGACT
GAATTAGCCC GTAGTGGCAT GGCGTTAGGC TTAGCGGGTC TGTTTATTGA GGCTCACCCA
GATCCAGATA ACGCTAAATG TGATGGCCCA TGTGCGCTGC CACTGCATCA GTTAGAAAAC
TATCTGAAAC AGATGAAGGC GATTGATGAT TTAGTGAAAT CCTTCGACCC GATAGATACC
AGCAAGTAA
 
Protein sequence
MSNKIINLGS IEIANDKPFV LFGGMNVLES RDLAMSIAET YAEVTQKLGI PYVFKASFDK 
ANRSSVNSYR GPGMEEGLKI FEEIKKTFNL PLITDVHETY QCAPVAEVVD IIQLPAFLAR
QTDLVVAMAK TGAIINVKKP QFLAPHEMRH IITKFNEAGN DEIILCERGS CFGYNNLVVD
MLGMDEMKQS GYPVIFDATH ALQRPGGRAD SAGGRRAQAT ELARSGMALG LAGLFIEAHP
DPDNAKCDGP CALPLHQLEN YLKQMKAIDD LVKSFDPIDT SK