Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0770 |
Symbol | |
ID | 4476981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 892710 |
End bp | 893570 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639725306 |
Product | HemK family modification methylase |
Protein accession | YP_868414 |
Protein GI | 117919222 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.163126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGATC AATCGAGTAT CGCCGAGGCC CTGCAATGGG CCTATGTTCA GCTAGCGCCT ACCTCTGAAT CCGCCCATCT GGATGCAGAG GTTTTCCTGC TGTATTGCCT CAATAAAAAC CGTGCATTTC TCTACACTTG GCCCGAAAAA GCCTTGACGG TGGAGCAGTG GAAACGTTTC CAGCAAATGG TGCAACGTCG CCAGCAGGGC GTACCCGTGG CACATATTGT GGGCGAGCGT GAGTTTTGGT CGCTGCCCTT TATCGTGAAT GACACCACGT TAATCCCTCG CCCAGATACC GAAATCCTGG TTGAAACCGC CTTAAACTTG CCGCTTGAGA GCAATGCTAA GGTGCTGGAT TTAGGAACTG GAACCGGTGC TATTGCGCTG GCGTTGGCTT CTGAGCGAGC GACTTGGCAA ATCACCGCCG TCGATAAGGT GGAAGATGCA GTGGCATTGG CCAAAGCGAA CCGGACTAAC CTTAAGCTCG AGCAGGTGGA GATCCTCCAA AGTGACTGGT TTAGCGCTAT CAAGGCCCAC GACTTTGATT TAATTGTCTC AAATCCGCCT TACATCGATG AGGCCGATGA GCATTTACAT CAAGGGGATG TGCGCTTCGA GCCGCAAAGT GCGCTCACCG CCGCCGATGA GGGTTTTGCC GATCTCTACT ACATCGCAAA AACTGCTCGG GATTATCTGA AGCCCAACGG CTATATTCTG CTCGAACACG GATTTGAGCA GGCGGTAAAG CTCAGAGAAA AACTGACCGA GCTGGGTTAT CAAAATGTCG CGACCGTGCG GGATTTTGGC AGCAACGACA GATGCACTAT GGGTAAGTGG ATGGGATTGA TTGGAATTTA A
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Protein sequence | MADQSSIAEA LQWAYVQLAP TSESAHLDAE VFLLYCLNKN RAFLYTWPEK ALTVEQWKRF QQMVQRRQQG VPVAHIVGER EFWSLPFIVN DTTLIPRPDT EILVETALNL PLESNAKVLD LGTGTGAIAL ALASERATWQ ITAVDKVEDA VALAKANRTN LKLEQVEILQ SDWFSAIKAH DFDLIVSNPP YIDEADEHLH QGDVRFEPQS ALTAADEGFA DLYYIAKTAR DYLKPNGYIL LEHGFEQAVK LREKLTELGY QNVATVRDFG SNDRCTMGKW MGLIGI
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