| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0767 |
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| Symbol | |
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| ID | 4476978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 889452 |
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| End bp | 890096 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725303 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_868411 |
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| Protein GI | 117919219 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000782252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATT TGAAGCGCTT CACAAAATCC ATTTTCTCTT GTATCGCCTT GAGCGGCCTA
TTGTTTTTAG GCGGCTGTGA AACCCTGCCG CCAACGACAG ATCTCAGCCC TATGACGGTC
GACAATGCCG CCCAAGCCAA GGCATGGGAA TTACAGGGGA AACTCGCTAT CCGCACGCCA
CAGGATAAGC TCAGCGCCAA TCTCTATTGG CGCCACAGTG AGGAGCGAGA CGAACTCACC
CTCACCACTA TGCTCGGCAC CACAGTGTTG ACCTTGGATG CTACGCCTAA CTCGGCTCAC
CTGCATGTCG ATGGCAAAGA TTTTCGTGAT AGCAACGCCC AAGCATTACT CGAGCGAGTC
AGCGGCTGGT CCATCCCGAT TAACGACTTA CCCCTTTGGA TAACAGGCCA AGTCGGCGCT
TTAGACCGTG TGCTTGCCGT CGATAGCAAT GGCAAAACCA AACAAATTCA AAACTCGCAA
ACCTTGCCGC CTTGGGTCGT CACATTTTTG AGTTGGCAGC CCCAAAGCGG TGCCGAGGTG
CCCTATCAGT TAAAGCTTGA ACGTGGTGAT TTACAGCTCA AGCTGCAACT CAATCAATGG
CAAGCCTTAG GTAAACCCTC AATACTGCTC GGAGAAAAAC CTTAG
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| Protein sequence | MNNLKRFTKS IFSCIALSGL LFLGGCETLP PTTDLSPMTV DNAAQAKAWE LQGKLAIRTP
QDKLSANLYW RHSEERDELT LTTMLGTTVL TLDATPNSAH LHVDGKDFRD SNAQALLERV
SGWSIPINDL PLWITGQVGA LDRVLAVDSN GKTKQIQNSQ TLPPWVVTFL SWQPQSGAEV
PYQLKLERGD LQLKLQLNQW QALGKPSILL GEKP
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