| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0766 |
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| Symbol | ipk |
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| ID | 4476977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 888596 |
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| End bp | 889450 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725302 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_868410 |
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| Protein GI | 117919218 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0877496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATG AGATTTCACG CAACTGGCCC GCGCCCGCCA AATTAAATCT GTTTTTGCAT
ATCAACGGGC GCCGCGCCGA CGGTTACCAT GAGTTGCAAA CCCTGTTTCA ATTTATCGAT
TGTTGCGATC AACTCGATTT TAGGGTGACG CAGACGCCTG AGCTGATATT GCACTCGAAC
ATGTCGGCCG TTGTCGCCGA TAGCGATAAC TTAATTCTGC GAGCCGCAAA ATCATTACAG
CAAGCGACAA GTTATCCTGG CGGCGCCGAA ATCTGGCTCG AAAAACGTTT ACCCATGGGC
GGTGGTTTAG GTGGCGGCTC CTCCGATGCG GCCACCACAC TCGTGGCCTT AAATCAGTTG
TGGAACACCC AATTATCTAA CGATGAATTA GCGGCGATTG GTTTAAAACT CGGTGCCGAT
ATCCCTGTTT TTATTCGCGG TTTCGCGGCA TTTGCCGAAG GCGTTGGCGA ACGTTTACAG
GCGGTGACGC CCACTGAATT TTGGTATTTA GTGATAGCGC CCGATGCCCA TGTCTCCACC
GCTGCGGTGT TCCAAGATCC TTTGCTACCC CGCAATACAC CTAAGCTTGG CATCGACACC
TTAATGAGCC AACCTTGGGC AAATGATTGC CAAGATCTGG TCGTTTCCAA ATACCCTCAA
GTTGCCAAGG CCTTAGGCTG GCTGCTAGAA TATGCGCCGT CGAGAATGAC CGGAACGGGC
GCATGCGTGT TTGGGGAGTT TTCTTCGCAG CAGCAAGCTC TCGCAGCCTT GGCGAAATTA
CCGTCTGATA TGCAAGGATT TGTTGCAAAA GGGATGAATA TTTCGCCGCT CATAGTGCGA
CTCACTCATC CATAA
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| Protein sequence | MSNEISRNWP APAKLNLFLH INGRRADGYH ELQTLFQFID CCDQLDFRVT QTPELILHSN
MSAVVADSDN LILRAAKSLQ QATSYPGGAE IWLEKRLPMG GGLGGGSSDA ATTLVALNQL
WNTQLSNDEL AAIGLKLGAD IPVFIRGFAA FAEGVGERLQ AVTPTEFWYL VIAPDAHVST
AAVFQDPLLP RNTPKLGIDT LMSQPWANDC QDLVVSKYPQ VAKALGWLLE YAPSRMTGTG
ACVFGEFSSQ QQALAALAKL PSDMQGFVAK GMNISPLIVR LTHP
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