Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0758 |
Symbol | |
ID | 4476969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 878828 |
End bp | 879613 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725294 |
Product | hypothetical protein |
Protein accession | YP_868402 |
Protein GI | 117919210 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0270421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.286638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAGT TATTTCGTAC CTTTTTTATC TTTCTACTCT TATTATCGAC CCGCACAGGC GTAGCCAATC CTTTAGATAT CAATGACAGC AGAGCCGAAC GCGGTAATTA CAGTGCAAGA CAGGCTCAAA GCCATGATCT GCATGGTCTT TATGCGCTCA ACACTCAAAC TTTCGACACT CCGCGTCAAG CGTCAACCTG TTTAGACAAC TTATATTCCA ACGCCCACGC GGCCCAGAAT GAACTCGCAA GCCTGTTGCA GACAGTGACG GCCAGTTCAC AGGCGCAGGT GATTTTACCT GACGTGAAAA GCTATCAACG CGCCGCCGAG AAGGTCGCCA CCAAATTTAA TGGGGATGCT AGCCAGATCA CCGATCTTGC CCGCGCCAGC ATCGTCAGTA ACAGCATCTC CGAGCTGATG CAAAGCTACT ACGCCTTAAG CGAGCAAGCT CAGGTCGTGA AACAGAAAAA CCGTTTCGCC GAGCCTAAAG CCTCAGGTTA TCGCGACCTT AACTTACTGG TACGTTTGCC CGAAAGCGGC ATGATTGCCG AGGTCCAATT ACACCTTAAG GATATTGCCG ACATCAAAAG TGGCCCAGAG CACAAGGTTT ACGAACAGGT TCAACAGATT GAGGCAAATG CAATAAAACA ACAACGTGCA TTAAGTGAGT TTGAAACCGC ACAGATCGCT AAGCTGTGCC AAGAGTCCCA TAAGCTGTAT CACAAAGCTT GGCTTAACTA TAAACGCGTC GATGAAGGAC TGTTGCTGAC TAACTCAGTT GCTTAA
|
Protein sequence | MNKLFRTFFI FLLLLSTRTG VANPLDINDS RAERGNYSAR QAQSHDLHGL YALNTQTFDT PRQASTCLDN LYSNAHAAQN ELASLLQTVT ASSQAQVILP DVKSYQRAAE KVATKFNGDA SQITDLARAS IVSNSISELM QSYYALSEQA QVVKQKNRFA EPKASGYRDL NLLVRLPESG MIAEVQLHLK DIADIKSGPE HKVYEQVQQI EANAIKQQRA LSEFETAQIA KLCQESHKLY HKAWLNYKRV DEGLLLTNSV A
|
| |