| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0752 |
|---|
| Symbol | |
|---|
| ID | 4476963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 872127 |
|---|
| End bp | 873413 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639725288 |
|---|
| Product | putative manganese transporter |
|---|
| Protein accession | YP_868396 |
|---|
| Protein GI | 117919204 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0350647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTT CTCAAGTAAA ACCTCTCCCC ATGAATTGGA CAGCCCAACT GGCCCTCAGC
ATAAAAGCCA TGGGACCCGG TGTATTAATG GCCGCCGCCG CGATTGGGGC TTCACATTTA
GTGTCATCCA CTCGCGCTGG CGCAGAATTT GGCTGGCAAC TCGCCTGGGT GATTTTGGGA
GTAAACTTGC TGAAATACCC CTTCTTTGCC GCAGGGGCAC GTTACACCGC TGCAACGGGC
GAAAGTTTAC TGCATGGATA TCTTAAGCAG GGCCGAGGTT ATCTGTGGTT ATTCACGGGC
CTCAATGTAA TAGCCTCTAT TGCAAGCACC GCTGGGGTTT GCATGTTAAC CGCCGCAATG
CTCACGCAGT TTATTCCATT ACCCATAGAT ATTTTGGCGT TACTGGTGCT GATAAGTTCG
TTGTTGTTAT TGATTTTAGG GCACTATTCA TTGTTGGATA GGCTGACGAA AATCATCATG
TTCGCCCTGA CACTCACGAC CTTAACCGCC GTCGCCTTGG CATTGGATCA TGTAAAACCG
CTAGAAAGCC AGTTTGTCTC CCCCTCACCT TGGCAGTGGG CCCATGTGGG ATTCTTGGTC
GCCATGATGG GCTGGATGCC TGCACCTATT GAAGTCAGCG CATGGAATTC GTTGTGGTTA
TTGGAAAAAC AAAAGACATC ACCCGTTACT CCCGCCCAAG CTATCTTAGA CTTCAACTTA
GGCTATCTAG TCACTGCTCT GTTAGCCGTG GTCTTTTTGG CCTTAGGTGC GCTGGTGATG
CATGGCAGTG GTGAGCACTT TTCCGACTCT GGTGCCAAAT TTGCGAACCA ATTAATCAAC
TTATATAGCC AAGTCATGGG GGGTGAAAGC CGCTATTTGA TAGGCATAGT GGCGTTTTTA
TGTATTTTCA GCACCACTGT GACTGTCATC GATGGCTATA GCCGAACCTT GAACATGGGC
TGGCAACTGC TCTCACGCGC AGCAGTCAGC GAAACCCAAT CGGACAAACG CCTAACGGGC
ATCATGCTCA GCGTAAGCGC ATTAGGATTA TTGCTCATCC TGTTTTTCAA GGGCGCCCTG
CTGCCACTGC TGGAGTTTGT GATGATTTTA GCTTTTATGA CTACAGTAGT TTTTGCATGG
CTCAACTATC GCTTAATGAC TAGCACCCAA CTGCCAGAGG CTCATCGTTA TGGCATAAAA
ATGAAAGGCC TCTCTTGGAT AGGATTAAGC TATTTGCTTA TTTTTGCAGT GCTTTTTATT
TACTGGTATC TAGCCGTTAA CGTGTAG
|
|---|
| Protein sequence | MATSQVKPLP MNWTAQLALS IKAMGPGVLM AAAAIGASHL VSSTRAGAEF GWQLAWVILG
VNLLKYPFFA AGARYTAATG ESLLHGYLKQ GRGYLWLFTG LNVIASIAST AGVCMLTAAM
LTQFIPLPID ILALLVLISS LLLLILGHYS LLDRLTKIIM FALTLTTLTA VALALDHVKP
LESQFVSPSP WQWAHVGFLV AMMGWMPAPI EVSAWNSLWL LEKQKTSPVT PAQAILDFNL
GYLVTALLAV VFLALGALVM HGSGEHFSDS GAKFANQLIN LYSQVMGGES RYLIGIVAFL
CIFSTTVTVI DGYSRTLNMG WQLLSRAAVS ETQSDKRLTG IMLSVSALGL LLILFFKGAL
LPLLEFVMIL AFMTTVVFAW LNYRLMTSTQ LPEAHRYGIK MKGLSWIGLS YLLIFAVLFI
YWYLAVNV
|
|---|
| |