| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0745 |
|---|
| Symbol | |
|---|
| ID | 4476956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 864279 |
|---|
| End bp | 865460 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639725281 |
|---|
| Product | putative iron-sulfur cluster binding protein |
|---|
| Protein accession | YP_868389 |
|---|
| Protein GI | 117919197 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0556677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCA CAGTGACCTC TCCCGCCAAT ATTCCCGACG CAGCCACCCT TGGCCGCCTT
GCTCTGCAAA TCAAGACTTG GGGAAAGGCG CTCGGTTTTG CCCAAATAGG GGTCTGCGAC
ACCGACTTAA CTGCGGAAGA GCTCAAATTA CAGGCTTGGC TGGATAAAGG ATATCACGGG
GAAATGGGCT ACATGGCGAC CCATGGCATG ATGCGCGCTC GCCCCCACGA ATTGCACCCA
GGCACAGTTC GAGTGATTTC AGCACGGATG GATTATCTAC CGCCAGAGGC AGGTTTTGCC
ACTAACTTAG CCTCGCCGAA TATGGGCTAT ATCTCGCGTT ATGCGGGCGG TAGGGATTAC
CACAAACTCA TCCGTGCTCG CTTAAAAAAA CTGGGGGATC AAATTAGTAG CGAGCTTGTC
TCTCTCGGGT TCGATGCTGC CGACTTTAGA CCCTTTGTCG ATTCTGCCCC TGTGCTCGAA
CGTCCACTCG CCGAAAAAGC TGGCATAGGC TGGACAGGTA AGCACTCACT TATCCTTAAT
CACGATGCGG GCAGTTGGTT CTTCCTCGGG GAATTACTGA TCAACCTGCC TTTACCCGTA
GACATTCCTA TCCAGGAAGA CTGCAACACC TGCGTGGCCT GCATCACCTC CTGCCCAACA
GGCGCTATCG TCGAGCCTTA TACCGTGGAT GCTCGGCGCT GTATTTCTTA TCTGACAATC
GAGTTACAGG GCGCTATTCC AGAGGAGTTT CGCCCTTTGA TGGGCAATCG CATTTACGGT
TGTGATGATT GTCAGTTGGT GTGCCCGGTC AATCGCGAGG CACCGCTGAC TAAGGAGACT
GATTTCCACA TTCGGCCTAA GCTCAAGCAG CCAGAACTGC TTACCTTGTT TGCCTGGAGC
GAAGCCGAGT TTCTCAAACA GACCGAAGGC AGCGCCATTC GCCGTATTGG TCATCAGCGC
TGGCTACGCA ATATTGCCGT AGCCCTAGGC AATGCGCCGA GTTCGCCGCA AATCATCGCC
TCCCTCGAGC AACGTAAAGC CCTAGTGGAT GTCGATGATA TGGTGAAAGA ACATATCGAT
TGGGCCCTAG CACAGCAACA CTCAGGAAGC TCACCAGCCA ATAACCGTAA AACGGAGCGA
CTGGTTCGGG TGATTCAAAA AGGCCTACCA CGGGATGCCT AG
|
|---|
| Protein sequence | MSTTVTSPAN IPDAATLGRL ALQIKTWGKA LGFAQIGVCD TDLTAEELKL QAWLDKGYHG
EMGYMATHGM MRARPHELHP GTVRVISARM DYLPPEAGFA TNLASPNMGY ISRYAGGRDY
HKLIRARLKK LGDQISSELV SLGFDAADFR PFVDSAPVLE RPLAEKAGIG WTGKHSLILN
HDAGSWFFLG ELLINLPLPV DIPIQEDCNT CVACITSCPT GAIVEPYTVD ARRCISYLTI
ELQGAIPEEF RPLMGNRIYG CDDCQLVCPV NREAPLTKET DFHIRPKLKQ PELLTLFAWS
EAEFLKQTEG SAIRRIGHQR WLRNIAVALG NAPSSPQIIA SLEQRKALVD VDDMVKEHID
WALAQQHSGS SPANNRKTER LVRVIQKGLP RDA
|
|---|
| |