Gene Shewana3_0735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0735 
Symbol 
ID4476945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp854196 
End bp855029 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID639725270 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_868379 
Protein GI117919187 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.349045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000365596 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGAAG CCTATCAGAA TCGCTTTAGT GGCATTGGCC GCTTGTACGG GCAAAAGGCG 
CTCGCTAAAT TTGCCGCCTC CCATGTGGTG GTGATTGGCA TTGGCGGCGT TGGCACATGG
GCGGCTGAGG CGTTGGCGCG CAGTGGTATT GGCCAAATCA CCTTGATTGA TTTGGATGAT
ATCTGTGTAA CGAACACCAA CCGTCAAATT CATGCTCTGT CATCGACAAT TGGTGAGTCT
AAAGTGGCTG TGATGGCGCA GCGGATCCGT TCGATCAACC CCGATTGTCA AGTCAATGAA
GTGGAAGACT TTATTACAGT CGATAACCTT GGTGAGTATT TGCTTGGGGC CAAGGCGGGT
GGCAATATTG ATTATGTAGT GGATTGTATT GATGCGGTTA AGCAAAAGGC GGCGCTGATT
GCTTGGTGTA AACGTCAAAA AATTAAGATA GTGACCGTTG GCGGCGCGGG CGGCCAAACC
GATCCAACAC AGATCCAGCT TACCGATCTG GCTAAAACCT ACCAAGATCC TTTATTGGCC
AAAGTGCGTA ATATTTTGCG CCGCGAATAT AACTTTTCCA AAAATGTGCA GCGCCGTTTT
GCCGTCGATG CAGTGTTTTC CAGTGAGCAA TTAGTTTATC CCCAAGCCGA TGGTTCTGTG
TGTAGTAGCA AAGCGACGGC CGATGGTTCT ATGCGCATGG ATTGTGCTTC TGGCTTTGGC
GCCGTCACTA TGGTGACTGG GACTTTTGGT TTTGTGGCGG CTAGCCGGGT ACTTGCTAGG
CTCGCCCAAA TTGCAAATGA ACCCGTTGCA AATGAACCAG CTGCGAGTGA ATAA
 
Protein sequence
MTEAYQNRFS GIGRLYGQKA LAKFAASHVV VIGIGGVGTW AAEALARSGI GQITLIDLDD 
ICVTNTNRQI HALSSTIGES KVAVMAQRIR SINPDCQVNE VEDFITVDNL GEYLLGAKAG
GNIDYVVDCI DAVKQKAALI AWCKRQKIKI VTVGGAGGQT DPTQIQLTDL AKTYQDPLLA
KVRNILRREY NFSKNVQRRF AVDAVFSSEQ LVYPQADGSV CSSKATADGS MRMDCASGFG
AVTMVTGTFG FVAASRVLAR LAQIANEPVA NEPAASE