| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0734 |
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| Symbol | |
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| ID | 4476944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 852715 |
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| End bp | 853779 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639725269 |
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| Product | porin |
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| Protein accession | YP_868378 |
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| Protein GI | 117919186 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000494692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000362774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAGA ATCTGCTCAC TACAGCGATT GCCGCTAGTC TCGCATTTTG CTCATTTAAC
TCACTGGCCG ATGGCCCTGA ATTTTACGGC CATGTCGACC TGAGTATCAC CGACTCAGAA
AAAGGTTACG CCACTCAAAA TCAGAAAGAT GGCACAGTAC TCGAAAACAA CTTTTCTTGG
GTGGGTGTCA AAGGCTCTGA AAGCGTAAGC CCTTACTTTG ATATCATCTA TCAAATGGAA
TTTGGCGTAG AAAATTTTGA TAACTCGAAT AAAACCTTCA ATGCACGTAA TACCTTCCTT
GGGGTGAGAA GCGTTGCGGG TACCGTTTTA GCGGGCCGTA ACGATACGGT ATTTAAAGCG
TCCGAAGGCG GTTTTGATTT GTTTGGCAAC ACCAACGCCG ACATCGACCT GTTATTGGCA
GGCCAAACGC GCTCAGCCGA TGGCATTTCC TATTATTCGC CTAAGATCGC CGATCTTATC
ACCCTCAACG CCACCTATCT GATGAGTGAC AACTACGATC AACGCGATAG CCAAGGCAAC
GAAGTTTATA ACCAAGATCA AATGTATGCC TTAAGCGCCA CTTTAGGCGA CAAGACCTTT
AAAACCCATA ATTACTATGT TGCGGCGGCC TATAACGATG GCATCGAAAA TATCGAAGCC
TACCGTGGTG TTGCCCAAGC AAAATTTGGC GATTTCCTCT TTGGTGCCAT TTATCAGCAC
AGCGAGCATA TTGACGACAG ATTCTCAAAT CTCTCGGGTG AGACCTATTT TGTAAATGCT
GCTTATCTGA TGGATAATTT GAAACTCAAG CTGGTTTACG GCAAAGATGA CTCTGGTTTA
GGCAAATATG TCAGCCGTTT TGTCGGCAGC CAAGACAGCG GTAACCTCGA ACAAGTGAGT
GATGTCGACC TTCAACAGCT CACAGTAGGC GCAGATTACC GACTTAGCAC TAAGACTATG
GTCTATGGTC ACTACACTCG CTTCGACGGC GACCTTATGC TAGCAGGTAC AAAACAAGAC
CTAGACGACA ACGTGTTTAC TGTAGGTTTA CGTATTGATT TTTAA
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| Protein sequence | MKKNLLTTAI AASLAFCSFN SLADGPEFYG HVDLSITDSE KGYATQNQKD GTVLENNFSW
VGVKGSESVS PYFDIIYQME FGVENFDNSN KTFNARNTFL GVRSVAGTVL AGRNDTVFKA
SEGGFDLFGN TNADIDLLLA GQTRSADGIS YYSPKIADLI TLNATYLMSD NYDQRDSQGN
EVYNQDQMYA LSATLGDKTF KTHNYYVAAA YNDGIENIEA YRGVAQAKFG DFLFGAIYQH
SEHIDDRFSN LSGETYFVNA AYLMDNLKLK LVYGKDDSGL GKYVSRFVGS QDSGNLEQVS
DVDLQQLTVG ADYRLSTKTM VYGHYTRFDG DLMLAGTKQD LDDNVFTVGL RIDF
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