| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0733 |
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| Symbol | |
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| ID | 4476943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 851205 |
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| End bp | 852284 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639725268 |
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| Product | porin |
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| Protein accession | YP_868377 |
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| Protein GI | 117919185 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000551944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000318488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAGA CATTCATCTC TGCATCAGTT GCATCAGTAT TAGCGCTGGC TTCATTCGGT
GCGCTAGCCG AAGGCCCAAG CTTCTACGGT CGTTTAGAGC TTGCTGTAAC TAATACTGAA
ACAGGTGCAA CTCTACAATC TGGCACAAAC GGCTTAAACT CAAACTATGC CGATGAGAAT
AACGCTGGTA CCTATTTAGA AAACAACTTC TCTTTATTAG GTGTTAAAGG TACTGAGAAG
ATTGCTGATG GCTATGACGT TGTTTATCAA ATGGAATTCC AAGTTGAAAG CACTTCTGGC
TCAGGTGACG TGTTCAAAGC TCGTAACACT TACTTAGGTT TAAAAACCAA TGCAGGTACT
GTATTAGTCG GTCGTAATGA CACAGTATTC AAGCAAGCTG AAGGCGGCGT AGATATTTTC
GGTAACACCA ACGCGGATAT CGACCGTTTA GTTAGCGCTC AAACTCGTAG TGCCGATGGT
GTATGGTACT TCTCACCTAA ACTCGGTGGT TTAGTGACAT TAAATGCTAA CTACCTGTTC
GATGATAACA ACGATGAAAA AATAGACGGA AAACCTGCTC CAGATACCAA TGAAAGCTTA
TACGCTCTGA GTGCAACTCT AGGTGATAGT AAGTTCAAAG AGCAAAACTA CTATGTAGCT
GTTGCTTACA ACAAAGGTAT CGCTGGTGTT GATGCATACC GTGGTGTAGC CCAGGCTAAA
TTAGGTCAGT TCAAACTCGG TGGTTTATTC CAAAACTCTG AAAGCGTAAC TGATAGCGCT
ATCGACGGTA ACACTTACTT CGTGAACGTA TCTTACGATC TGAACGGTGT GAACCTGAAA
GCTGAATACG GCTACGATGA AGCTGGTTTC GGTAAATATT ACAGCACGTT AGGCAAAGCA
GGTGCTGACG ATATTAGCGT AAACAATATC AACGTTGGCG CTGACTACCG TTTATCCAAA
TCAACTATGG TGTATGGCCA GTACTCAATG TACAAAGGCG ACTATAAAGA CACTACTGGC
GCTAAAATCG ACTTACAAGA CGACAACGTA TTCTCTGTAG GTGTACGTTA CGACTTCTAA
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| Protein sequence | MKKTFISASV ASVLALASFG ALAEGPSFYG RLELAVTNTE TGATLQSGTN GLNSNYADEN
NAGTYLENNF SLLGVKGTEK IADGYDVVYQ MEFQVESTSG SGDVFKARNT YLGLKTNAGT
VLVGRNDTVF KQAEGGVDIF GNTNADIDRL VSAQTRSADG VWYFSPKLGG LVTLNANYLF
DDNNDEKIDG KPAPDTNESL YALSATLGDS KFKEQNYYVA VAYNKGIAGV DAYRGVAQAK
LGQFKLGGLF QNSESVTDSA IDGNTYFVNV SYDLNGVNLK AEYGYDEAGF GKYYSTLGKA
GADDISVNNI NVGADYRLSK STMVYGQYSM YKGDYKDTTG AKIDLQDDNV FSVGVRYDF
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