Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0732 |
Symbol | |
ID | 4476942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 848757 |
End bp | 851033 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725267 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_868376 |
Protein GI | 117919184 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.207588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000634577 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTGACG CGATCAAGTT AAGCTTAGAT GGCGTAGAGC AGATGCCCCT GCGGCGCTTT ACCGAAGAAG CTTATCTGAA CTATTCCATG TACGTCATCA TGGACCGAGC CTTGCCCCAT ATCGGTGACG GGCTTAAGCC GGTGCAGCGG CGGATTATTT ATGCCATGAG TGAGCTCGGG TTATCAGCTC AGTCAAAACA TAAAAAATCA GCCCGTACCG TCGGTGACGT ATTAGGTAAG TACCATCCCC ATGGCGACAG CGCGTGTTAT GAGGCTATGG TACTGATGGC GCAGCCATTT TCTTACCGTT ATCCGCTAGT CGATGGTCAA GGTAACTGGG GTGCGCCAGA CGATCCTAAG TCCTTCGCCG CGATGCGTTA TACCGAGGCG CGCCTGTCTA AGTTCTCCGA AGTATTATTG TCTGAGCTGG GACAAGGTAC GGTCGAATGG GGCGCTAACT TCGATGGCAC CTTGAAAGAA CCTAAAGTGC TGCCCGCACG TTTGCCGCAT ATTTTACTCA ATGGCATCAC GGGTATCGCT GTCGGTATGG CGACGGATAT TCCGCCCCAT AACGCTAGAG AGTTAGTCAA TGCCTGTGTG GCACTGCTTG ACGATCCTAA ACTCGAACTT GAGCAATTGA TGGGCTATGT GCCTGGGCCT GATTATCCGA CCGAGGCCGA GATCATCACG CCAGCGGCTG ACATTGCCAA AGTCTATGAG ACGGGCCGTG GCTCCATAAA AGCCCGCGCC GTGTATAGCG TCGATGCTGG TGAGATAGTG ATCACCGCGC TGCCGCACCA AGCCAGTAGC GGCAAAATTT TAGAGCAAAT CGCCGCCCAG ATGCAGGCGA AAAAGTTGCC TATGGTGGCT GACTTACGTG ATGAGTCTGA CCACGAAAAC CCTGTGCGAC TAGTGGTGGT GCCGCGTTCA AATCGCGTCG ATTGCGATCA ACTGATGGCG CACTTGTTTG CGACCACAGA TCTTGAGAAA AGCTTTAGGG TAAACCTGAA CGTCTTGGGC CTAGATGGTC GTCCACGCGT CAAAGGATTA AAAGAGCTAT TAACCGAATG GTTAGAGTTC CGTGTCGATA CCGTAAGGCG TCGTCTCGAG TATCGCCTCG ATAAAGTCTT AGCACGGTTA CATATCCTCG AAGCCTTGAT GATAGCCTTC CTCAATATCG ATGAAGTGAT TGAAATCATT CGTTTCCACG ATGAGCCAAA GGCCGAGTTA ATGGCGCGCT TTAACCTGAC GGATAGGCAA GCCGAAGCCA TCCTCGAGTT AAAGTTACGT CATTTAGCCA AGTTAGAAGA GTTTAAAATC AAGGCCGAGC AGGATGAGCT TGAGGCCGAG CGTGAGAAAT TAGAACAGTT ATTAAGCTCA GATCGCCGCT TAAAAACCTT GATCAAGAAA GAATTAATTC AAGATGGCGA AACCTATGGC GACGATCGCC GCTCACCGAT TGTTGAGCGC CATGAATCCC GTGCCTTAAC CGAGCAGGAG CTGACGCCGA GCGAGCCAGT GACTGTAGTG TTATCTGAAA AAGGCTGGGT GCGTTGCGCT AAGGGCCATG ATATCGATGC CGAGTCTTTG TCCTATAAGG CGGGGGATCA ATATCTATGC AGTGCGATGG GACGCAGTAA TCAGGCGGCG GTATTTATTG ATTCATCGGG ACGCGCCTTT GCGACCGACA GTCACAGCCT GCCATCGGCG AGGAGCCAAG GCGAGCCCAT CACCACGCGC TTTAATATGG CGCCGGGTGA AACCATGCAG CATGTGATTT TGGGTGAAGA CGAGCAATGT TTCCTACTCG CCACCGATGC AGGTTACGGT TTTATCTGTA CTTATAACGA TATGGTGTCA CGTAACAAGG CGGGTAAAGC CCTGTTAAGC TTACCGACGA ATGCCAAGTC TTTGCCGCCG AGACCTATTG ACCGCAATCG CGAGATGTCG ATTCTAGCCA TCACCAATGA AGGGCGTATG TTACTGTTTT CATTGGAAGC ATTGCCACAG TTGTCTAAGG GTAAGGGTAA CAAGATTATC GGTATTCCGA GTGAGCGCGC TAAGAATCGT GAAGAGTTGA TGACCCACTT ACAACTTGTG CCAGCAGACA CTTCGGTCAC CCTATGGGCA GGTAAGCGTA AACTCACCTT AAAACCGAGC GATTTAGAGC ATTATCGGGG TGAACGTGGC CGCCGCGGCG CCAAGTTACC ACGCGGGTTA CAACGTGTTG ATAGTGTTGA ATTAGGCGAA GGTGCAGAGG TTTTACCTAG CATTTAA
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Protein sequence | MSDAIKLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK SFAAMRYTEA RLSKFSEVLL SELGQGTVEW GANFDGTLKE PKVLPARLPH ILLNGITGIA VGMATDIPPH NARELVNACV ALLDDPKLEL EQLMGYVPGP DYPTEAEIIT PAADIAKVYE TGRGSIKARA VYSVDAGEIV ITALPHQASS GKILEQIAAQ MQAKKLPMVA DLRDESDHEN PVRLVVVPRS NRVDCDQLMA HLFATTDLEK SFRVNLNVLG LDGRPRVKGL KELLTEWLEF RVDTVRRRLE YRLDKVLARL HILEALMIAF LNIDEVIEII RFHDEPKAEL MARFNLTDRQ AEAILELKLR HLAKLEEFKI KAEQDELEAE REKLEQLLSS DRRLKTLIKK ELIQDGETYG DDRRSPIVER HESRALTEQE LTPSEPVTVV LSEKGWVRCA KGHDIDAESL SYKAGDQYLC SAMGRSNQAA VFIDSSGRAF ATDSHSLPSA RSQGEPITTR FNMAPGETMQ HVILGEDEQC FLLATDAGYG FICTYNDMVS RNKAGKALLS LPTNAKSLPP RPIDRNREMS ILAITNEGRM LLFSLEALPQ LSKGKGNKII GIPSERAKNR EELMTHLQLV PADTSVTLWA GKRKLTLKPS DLEHYRGERG RRGAKLPRGL QRVDSVELGE GAEVLPSI
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