| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0730 |
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| Symbol | |
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| ID | 4476940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 845650 |
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| End bp | 847536 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725265 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_868374 |
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| Protein GI | 117919182 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000493764 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAATC AATACACCTC TGACGCCATT GAAGTTCTTA ACGGACTCGA CCCAGTTAAA
CGCCGTCCAG GTATGTATAC CGATACCACC CGACCTAACC ACTTAGGCCA AGAGGTCATA
GATAACAGTG TGGACGAGGC CTTAGCGGGC CACGCCACTA AAATCGAAGT TGTGCTCCAT
ACCGATAATT CCCTTGAAGT CACCGACGAT GGTCGGGGGA TGCCGGTAGA TATTCACCCT
GAAGAAGGCA TTCCCGGGGT CGAACTCATC CTTACTAAAC TGCATGCCGG CGGTAAATTT
TCGAATAAAA ATTACCAATT CTCCGGTGGT TTGCACGGTG TGGGGATTTC GGTGGTTAAC
GCTCTGTCTC GTCGCGTTGA AGTGACGGTA CGCCGTGACG GCCAAGTGTA TGATATTGCT
TTTGAAAATG GCTTTAAAGT TGAAGAATTA AAAGTTACAG GTACTTGCGG TCGTCGCAAT
ACTGGTACCC GAGTACATTT CTGGCCCGAC GCCAGCTATT TCGATTCGGC GAATTTCTCC
AACTCCAAAC TCATCTATTT GCTGCGCGCC AAGGCCGTGT TGTGTCCGGG TCTTAGGATC
AAATTTACTA ATAAACACAC CAACGAAGTC CATGAGTGGT ACTACGAGAG TGGTTTAACC
GATTATCTTA AGGCGGCGGT TGGCGATAAT TTAATGCTGC CAGAAGAGCC CTTTATCGGC
AGCTTTAAAG GTCAAATCGA AGCCGCTGAT TGGGCCATTA CTTGGCTGCC TGAAGGTGGC
GATGCGATCA ATGAAAGCTA TGTTAACTTG ATCCCAACGC CATTGGGTGG AACCCATGTG
AACGGTTTCC GCCAAGGTTT GCTGGAGTCG ATGCGCGAGT TCTGTGAGTT TCGCAATCTG
ATCCCCCGCG GCATCAAGCT GTCGCCTGAG GATATTTGGG ATCGCGCCGC CTTCATTCTC
TCGGTGAAGA TGCAAGATCC GCAGTTTGCC GGTCAAACCA AAGAGAAACT CTCGAGCCGT
CAAAGCTCTG CCTTCGTCTC TGGTATTGTG CGTGACGCGT TTTCACTGTG GCTCAACTCG
AATACAGAAT TGGCCGAGTC GCTGGCGGAC ATGTGTATTA ACAACGCCCA GCGCCGCTTA
AAAGCCTCGA AAAAAGTGGC CCGTAAAAAA GTCACCTCAG GCCCGGCATT ACCGGGTAAA
TTGACCGACT GTAGCGGCCA AGATCCGATG CGCGGCGAAC TCTTCTTAGT GGAAGGGGAC
TCTGCGGGCG GCAGTGCGAA GCAGGCGCGC GACCGTGAGT TTCAGGCCAT TATGCCGCTG
CGGGGTAAAA TCCTAAACAC GTGGGAGGTG GATGCTTCAC AGGTGTTGGC CTCGCAGGAA
GTGCATGACA TCTCGGTGGC GATTGGTTGC GATCCCGATA GCAACGATAT CTCCGAGCTA
AGATATGGCA AGATTTGTAT TCTCGCCGAC GCCGACTCCG ACGGGCTACA TATTGCAACT
TTACTCTGCG CCCTGTTTCT GAAACATTAC CGTGTGCTGG TCGAACAGGG CCATGTCTAT
ATCGCTATGC CACCGCTGTT CCGTATCGAT ATAGGTAAAG ATGTTTATTA CGCCTTAGAT
GAGGCTGAAA AAGAAGGTAT TCTCGACCGT ATTACTGCCG AGAATAAAAA GGGTAAGGTC
CAAGTTACGC GCTTTAAAGG TCTGGGTGAG ATGAACCCGC TGCAATTGCG TGAAACGACT
ATGGATCCAA ACACTCGCCG TTTAGTTCAG TTAACCATTG ATGATGTAGA AGAAACTGAC
TCACTGATGG ATATGTTGCT GGCTAAGAAA CGCTCGCCCG ATCGTAAAAA CTGGCTCGAG
GATAAGGGTG ACATGGCGGT ACTTTAA
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| Protein sequence | MTNQYTSDAI EVLNGLDPVK RRPGMYTDTT RPNHLGQEVI DNSVDEALAG HATKIEVVLH
TDNSLEVTDD GRGMPVDIHP EEGIPGVELI LTKLHAGGKF SNKNYQFSGG LHGVGISVVN
ALSRRVEVTV RRDGQVYDIA FENGFKVEEL KVTGTCGRRN TGTRVHFWPD ASYFDSANFS
NSKLIYLLRA KAVLCPGLRI KFTNKHTNEV HEWYYESGLT DYLKAAVGDN LMLPEEPFIG
SFKGQIEAAD WAITWLPEGG DAINESYVNL IPTPLGGTHV NGFRQGLLES MREFCEFRNL
IPRGIKLSPE DIWDRAAFIL SVKMQDPQFA GQTKEKLSSR QSSAFVSGIV RDAFSLWLNS
NTELAESLAD MCINNAQRRL KASKKVARKK VTSGPALPGK LTDCSGQDPM RGELFLVEGD
SAGGSAKQAR DREFQAIMPL RGKILNTWEV DASQVLASQE VHDISVAIGC DPDSNDISEL
RYGKICILAD ADSDGLHIAT LLCALFLKHY RVLVEQGHVY IAMPPLFRID IGKDVYYALD
EAEKEGILDR ITAENKKGKV QVTRFKGLGE MNPLQLRETT MDPNTRRLVQ LTIDDVEETD
SLMDMLLAKK RSPDRKNWLE DKGDMAVL
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