Gene Shewana3_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0717 
Symbol 
ID4476927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp835586 
End bp836260 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content50% 
IMG OID639725252 
Productputative hydroxylase 
Protein accessionYP_868361 
Protein GI117919169 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00266806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000189122 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTATTG AAATTCCGAA TGTTTTTTCT AAAGAAGAAG TCAATCAGCT AAGGGAACAG 
CTCGATGCCC GCACTTGGAT TGATGGCAAC CAGACTTCGG GCGTAATGGC GAGTACCCGC
AAGCGTAATC AGCAGTTAGA CAAAGATGAC CCTGTCGCAC TGCAAATCGG TGAGCTGATC
ATGGCGCGCT TATTGGCCCA CCCTTTATTT GTCTCGGCGG CGCTGCCGCT ACAGTTTTAT
CCTCCCTTGT TCAATCGTTA TCAAGGCGGC GAAACCTTTG GCTATCATAT CGATAATGCG
ATCCGCTCGA CCAGCGAAGG CATGGTGCGT ACCGATCTGT CAGCCACTTT ATTTTTAAGT
GAGCCAGACA CTTATCAAGG TGGTGAGCTG GTGATCCAAG ATACCTATGG TCAGCAAAGC
ATTAAGCTCG CGGCGGGCTC ATTGGTGTTG TATCCCTCGA CGAGTCTGCA TCAGGTTACT
CCTGTTACCT CGGGTGAACG TACCGCTGCT TTTATGTGGC TGCAGAGTAT GGTGCGCGAT
GAGGGGCAGC GTCGTTTGCT ATTTCAACTC GATCAATCGA TTCAATCGTT GACGGCGCAG
GCCGCGCCAG AACAAGAGTT GTTTAATCTG ACGGGGGTTT ACCATAACTT GCTCAGACGT
TGGAGCGAGT TGTAG
 
Protein sequence
MLIEIPNVFS KEEVNQLREQ LDARTWIDGN QTSGVMASTR KRNQQLDKDD PVALQIGELI 
MARLLAHPLF VSAALPLQFY PPLFNRYQGG ETFGYHIDNA IRSTSEGMVR TDLSATLFLS
EPDTYQGGEL VIQDTYGQQS IKLAAGSLVL YPSTSLHQVT PVTSGERTAA FMWLQSMVRD
EGQRRLLFQL DQSIQSLTAQ AAPEQELFNL TGVYHNLLRR WSEL