| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0716 |
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| Symbol | |
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| ID | 4476926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 833315 |
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| End bp | 835510 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725251 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_868360 |
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| Protein GI | 117919168 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000695687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000361428 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTG CAAAACGCCG CAATGGCCGA GTTACGCTCG GTGCCCATGT TTTAGGTTCG
TTAACGATTG GTATGGCGGT TTCAGCCGCT CCGGCTATGG CGACGGAGCC ACAGTCACAA
GTCGTTGATA AGAAAGTTGA ACATATTGAA GTGAACGGTG AGTACTTAGG TTACAACACC
CGTAAAGTGC AATCGGGTAA ATTTACCGAA GATCTGCTCA ATACCGCTAA AACCGTTACC
GTTATCAATC AAGATCTCAT CAAGGATATG GGCGCCCAGA GTTTTACCGA TGCACTGCGT
GCAACCCCCG GTATCACACT AGGGACAGGT GAGGGCGGCA ACCCCTACGG TGATAGACCC
TTTATCCGTG GTTACGACGC TCAATCTTCA ACCTTTATCA ATGGTATGCG TAATGTGGGC
TCACAAAGTC GCGAAACCTT TAACATTGAA CAAATCGAAG TCCTGAAAGG CCCAAGCTCT
GTGTATAACG GTCGCGGTGC CGTTGGCGGT AGCATCAATA TTGTGACCAA AAAAGCCCAA
TCCGAAGACT TTATTAATGC CGATGTTGCC GTCGGAACGG ATTCGCTAAA ACGCGCCAGT
GTCGATGTCA ACCATGTGAT TGCCGATGAG GCTGCAGTTC GTATCAACAT GATGGCCCAC
GATGCCGATA CCCCGGGGCG GGATGAAGTT ACGGGTAATC GTTGGGGTGT TGCGCCTTCG
GTGACCTTTG GTTTAACCAC GCCAACCAAA GTCACACTCG AATATTATCA CTTTGAAAAT
CATGATATTC CTGATTATGG TATTCCCTAC GATCAGGCAA CGGGTCAACC CGCAGATGTC
GACCCTGATA ACTTCTACGG TTTGTTGTCG CGGGATTTTC GCGACACTAT GGATGATACG
GCGTCAGTGT TGATCAGCCA TGATTTTAAC AACGACATGC AGTTCACTTC GACCTCCATC
TATAGCCGTA ACAGCAATTA CTATATTGTG ACCAACCCGG ACGATACCAC GGGCAACGTG
GCTAATGGTT ATGTTTGGCG AAACACTAAG TCGCGCCATT CGGTCACAAA GACCTTAGCG
ACTCAATTGC AACTCTCGGG TGAAGCAAAA CTCGCGGGAA TGACTAACCG TTTTGCCGTC
GGTACTGAAC TCAGTAACGA ACGTACCAGC AACTTGAGTT ACACCGTCGA TACGGGTAAT
GGCCGCAACG CGGGTTGTAA TCAGGCGATG CTGGACAACT ACAACTGTAC GCTGCTGGAT
AATCCAAATC CGCACGATCC TTGGGTTGGC ACTATTACCC TCGGCACCGA TGCGACTGTT
ACAGAAACCG ATACTCGCTC GCTTTATGCC TTTAACACCA TTGAGTTAAC CGAAGCGTGG
ATGGTGAACG CCGGGATCCG TTGGGATGAT TACAGCACCA GTGCTGAGAA TTCGACTTCT
GAATTCAGTA ACGATACCGA CTTCTTTAAC TATCAATTAT CAGTACTTTA TAAGCCTGCC
GAAAACGGCA GTATTTATGC CGCGTGGGGC ACTTCTTCTA ACCCTCCGGG AACCTCAAAT
GGTGATGGCG CGGATCGCCT CGGCAGTACC AACGCCGATT TAGAGCCGGA AGATACGGAA
AGCTATGAGT TAGGCACTAA GTGGGACTTC TTTGCTGGAC GTTTATCTTT GAATGGTTCG
GTATTCCAAA TCGAGAAAAA CAACGCTCGG GTTGCGACCT CTGGCGATCG TAACTCGCCG
CAGGAAAACG TTGGCGAGCA AAAGGTGAAA GGTTTCGAAC TCGGCTTCTC CGGTGACTTT
ACTGAGCATT GGCACGGTTT TGGTGGTTAC ACTTACTTGG ATGCAACGTT GGAAAGCAAT
GGCTATAACC AAGCGCAAAA TGGTAACCGC TTCCCCAATA CCGCTAAAAA TAGCTTAAGT
TTATTCACGA CTTACGATGT GACTGAGGAT TTTACTGTTG GTACGGGCGC GTACTACATG
GGTAAAGTTT ATGGTAATAC GGCTAACACG TTATCGATTC CATCCTACTG GCGTTTTGAT
TTGACCTCAT CCTATAAAAT GAGTGAATTC TTGACCTTAC GCCTGAACGT GCAGAATCTA
ACGGATGAAC GTTATTACGA TAAAGCGTAC ACCGCGCACT TTGCTAATAT GGCCCCTGGT
CGCTTAGTGA TGTTAAGTGC GGATATGCAC TTCTAA
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| Protein sequence | MKFAKRRNGR VTLGAHVLGS LTIGMAVSAA PAMATEPQSQ VVDKKVEHIE VNGEYLGYNT
RKVQSGKFTE DLLNTAKTVT VINQDLIKDM GAQSFTDALR ATPGITLGTG EGGNPYGDRP
FIRGYDAQSS TFINGMRNVG SQSRETFNIE QIEVLKGPSS VYNGRGAVGG SINIVTKKAQ
SEDFINADVA VGTDSLKRAS VDVNHVIADE AAVRINMMAH DADTPGRDEV TGNRWGVAPS
VTFGLTTPTK VTLEYYHFEN HDIPDYGIPY DQATGQPADV DPDNFYGLLS RDFRDTMDDT
ASVLISHDFN NDMQFTSTSI YSRNSNYYIV TNPDDTTGNV ANGYVWRNTK SRHSVTKTLA
TQLQLSGEAK LAGMTNRFAV GTELSNERTS NLSYTVDTGN GRNAGCNQAM LDNYNCTLLD
NPNPHDPWVG TITLGTDATV TETDTRSLYA FNTIELTEAW MVNAGIRWDD YSTSAENSTS
EFSNDTDFFN YQLSVLYKPA ENGSIYAAWG TSSNPPGTSN GDGADRLGST NADLEPEDTE
SYELGTKWDF FAGRLSLNGS VFQIEKNNAR VATSGDRNSP QENVGEQKVK GFELGFSGDF
TEHWHGFGGY TYLDATLESN GYNQAQNGNR FPNTAKNSLS LFTTYDVTED FTVGTGAYYM
GKVYGNTANT LSIPSYWRFD LTSSYKMSEF LTLRLNVQNL TDERYYDKAY TAHFANMAPG
RLVMLSADMH F
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