| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0715 |
|---|
| Symbol | |
|---|
| ID | 4476925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 832282 |
|---|
| End bp | 832746 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639725250 |
|---|
| Product | putative chemotaxis protein CheX |
|---|
| Protein accession | YP_868359 |
|---|
| Protein GI | 117919167 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1406] Predicted inhibitor of MCP methylation, homolog of CheC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000857864 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000181388 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCA ATTTTATTAA CCCTTTTCTG CAATCCCTGC TCAATGTCAT TTCGACGATG
GCAAGCATGG ATCTCACTCC GGGCAAGCCC CAAATTAAAA CCGACAACTT AGCCAAGGGT
GATGTGTCCG GGTTAATTGG TATGGTTGGG CCGCAGACTA AGGGGTCGTT ATCTATTACC
TTTGAACAAA AACTGGTACT GCAGATCATG CAAAATATGC TTGGGGAAAA CCCAGGTAAG
ATAAATGAAG AAGTCACCGA TCTCGTGGGT GAAATCACCA ACATGGTCAC AGGTGGAGCA
AAAAATCTTT TAGGACAAAA GGGTTACGAG TTCGAAATGG CAACCCCTAT GGTGGTTTCG
GGTAAAGGAC ATACCATTTC CCACAAAGCG AATGGCACCA AAATTATCAT GCCCTTCAGC
AGCCCATACG GCACTGCCTT TATTGAAATC TGCTTTGAAA ATTAA
|
|---|
| Protein sequence | MNVNFINPFL QSLLNVISTM ASMDLTPGKP QIKTDNLAKG DVSGLIGMVG PQTKGSLSIT
FEQKLVLQIM QNMLGENPGK INEEVTDLVG EITNMVTGGA KNLLGQKGYE FEMATPMVVS
GKGHTISHKA NGTKIIMPFS SPYGTAFIEI CFEN
|
|---|
| |