Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0714 |
Symbol | alr |
ID | 4476924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 831036 |
End bp | 832112 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639725249 |
Product | alanine racemase |
Protein accession | YP_868358 |
Protein GI | 117919166 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000257815 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000596589 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAACCTT TTCCCCGAGC AGAAATTAGC AGTAGTGCAC TGCAGAACAA TCTCGCCGTC TTGCGTCAAC AGGCGAGTCG CAGCCAAGTA ATGGCGGTGG TGAAAGCCAA TGGTTATGGT CATGGATTAT TAAATGTCGC CAATTGTTTA CATACGGCTG ATGGCTTTGG TTTAGCCCGT TTAGAAGAGG CCTTAGAGCT GCGCGCTGGT GGCGTGAAGG CGCGCTTGTT ATTGCTTGAA GGCTTCTTTC GCAGCACTGA TTTACCTTTG TTGGTGGCCC ACGATATCGA TACTGTGGTG CACCACGAGT CGCAAATCGA AATGTTAGAG CAGGCGACGC TATCAAAACC TGTCACTGTA TGGTTGAAAG TGGATTCCGG CATGCATCGT TTAGGCGTAA CCCCTGAGCA ATTTACGCAG GTGTATGCGC GCTTGATGGC CTGTGACAAT GTCGCCAAGC CCATCCATTT GATGACTCAC TTTGCCTGTG CCGATGAGCC TGAAAATCAT TACACCCAAG TGCAAATGCA AACCTTTAAT CAGTTAACCG CGGATTTACC TGGGTTTAGA ACCTTAGCCA ATTCTGCGGG CGCCCTCTAT TGGCCCAAGA GCCAAGGGGA CTGGATCCGC CCTGGGATCG CGCTCTATGG CGTGTCGCCG GTGACAGGGG ATTGCGGCGC CAACCATGGT CTGATCCCGG CGATGAATTT AGTCTCGCGT TTAATTGCGG TGCGTGACCA CAAGGCAGGA CAACCCGTTG GCTATGGTTG TTATTGGACG GCGAAACAAG ATACTCGCCT TGGCGTTGTC GCGATTGGTT ATGGCGACGG TTATCCGCGT AATGCGCCAG AAGGCACGCC CGTGTGGGTT AATGGTCGCC GAGTACCGAT CGTTGGTCGT GTATCTATGG ATATGTTAAC TGTTGATTTA GGTGCTGATG CGACAGACCT TGTGGGCGAT GAAGCATTGC TCTGGGGCGC CGCTTTACCC GTTGAGGAAG TGGCTGAACA TATTGGCACC ATCGCCTATG AGTTAGTGAC TAAACTCACT CCAAGGGTTG CGGTGTGTCT TGCATAA
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Protein sequence | MKPFPRAEIS SSALQNNLAV LRQQASRSQV MAVVKANGYG HGLLNVANCL HTADGFGLAR LEEALELRAG GVKARLLLLE GFFRSTDLPL LVAHDIDTVV HHESQIEMLE QATLSKPVTV WLKVDSGMHR LGVTPEQFTQ VYARLMACDN VAKPIHLMTH FACADEPENH YTQVQMQTFN QLTADLPGFR TLANSAGALY WPKSQGDWIR PGIALYGVSP VTGDCGANHG LIPAMNLVSR LIAVRDHKAG QPVGYGCYWT AKQDTRLGVV AIGYGDGYPR NAPEGTPVWV NGRRVPIVGR VSMDMLTVDL GADATDLVGD EALLWGAALP VEEVAEHIGT IAYELVTKLT PRVAVCLA
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