Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0699 |
Symbol | |
ID | 4476909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 815712 |
End bp | 817136 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725234 |
Product | major facilitator transporter |
Protein accession | YP_868343 |
Protein GI | 117919151 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000337729 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00021718 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAATC CGCTACGCAC TTTCGCCTCT TTATATAGCA CGACTCTATT AACTGTGTTG GCAGGCGGTT TACTCACCAC CTATTTAGGC CTGCGCCTGT CGGTGATGCA CGTTCCACAG TTATGGATAG GCGGCATGAT GTCGGCCTAT TACGTCGGTC TGGTGGCAGG CTCTAAGATA GGTCACCGTT TGATTGCCCA AGTCGGGCAT ATTCGCGCCT TTGTCGCCAG CGCAGGAATA GTGGCCGCCT CCGCACTCGG CCACGCCTTA GTGGATGAGT TAGCGGTTTG GATCCTTTTA AGGCTTATCG TCGGTATGGG CATGATGTGC CAATACATGG TGCTTGAAAG CTGGCTCAAT GAGCAGGCCG AAAGCAGCCA ACGCGGCATT GTGTTCGCCA GCTACATGAT AGTCTCGTAT TTCGGTTTGA TATTGGGCCA AGGTGCCATC AGCCTCTATC CTGAACTCGG CCTAGAGCCG CTGTTACTGA TCGCCATCTG TTTTGCCCTG TGTATTGTCC CCATTTCCTT GACCCGCCGT ATTCACCCTG CGCCACTGGT ACCCGCGCCC TTAAAAATCG CCCATTATTG GCGCAAAGCC CCGCAAGCAC TGACGACTAT TGCGATAGGT AGCATGATTG TCGGCTCCTT TTACGGCTTG GCGCCCGCCT ATGCGAGTAA CTTAGGTTTA CCACCCGAGA AAGTCGCCAC CTATATGACG GCCACCATTC TTGCGGGTCT GCTGGCGCAA TGGCCGATGG GGAAATTATC CGACATTATG TCCCGCAGCC GGCTTATCCG CATTAACTGC GTATTGCTTG GGATCTTAGC GTTAGCTATC GCCCTCACGC CTTACCACCC CACACTCTCA CTGGTGATGA CGTTTCTGTT CGGTATTCTT GGTTTTACCT TCTACCCTTT GGCGACGGCA CTGGCCAACT CCCGTGTCGA GCAGAGCGAA AGGGTCGGTC TGTCGGCCAC CATATTACTG ACCTTCGGTC TTGGCGCCAG TATAGGTCCG CTTATCGCCT CAACCCTAAT GCAATGGCTC GGCAATAGCA TGCTCTATGG CTTTATGTCG GCCTGTACCT TAATTCTGTT TTTACGCCTG CGTTATGTTC ACTCACAACA AAAGGCCGAA ACCAATGTGA CTCAAGACTA CATCATGGCA ACCGGTGACT TAGTCTCATC CCCCTTGGCG GCCGCGCTCG ACCCAAGGGT TGATGTCGAA TCGGTGCAGG AGCAAATGAC CCCCACGCCC AGCGACGATG AAGAAGATTT AGGTGCCGAT GCCCTCGAGG ATAATGACAC TGACAGCGAA CAACAGCTGA CATTCGAGTT TGACGTTAAT CCAGAGCCGA CTTTTATTGA GGCAGAAACG AACGTTCTCG AAGAGTCAGA TCTCGATACG GTGAAAACCG CTTAA
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Protein sequence | MANPLRTFAS LYSTTLLTVL AGGLLTTYLG LRLSVMHVPQ LWIGGMMSAY YVGLVAGSKI GHRLIAQVGH IRAFVASAGI VAASALGHAL VDELAVWILL RLIVGMGMMC QYMVLESWLN EQAESSQRGI VFASYMIVSY FGLILGQGAI SLYPELGLEP LLLIAICFAL CIVPISLTRR IHPAPLVPAP LKIAHYWRKA PQALTTIAIG SMIVGSFYGL APAYASNLGL PPEKVATYMT ATILAGLLAQ WPMGKLSDIM SRSRLIRINC VLLGILALAI ALTPYHPTLS LVMTFLFGIL GFTFYPLATA LANSRVEQSE RVGLSATILL TFGLGASIGP LIASTLMQWL GNSMLYGFMS ACTLILFLRL RYVHSQQKAE TNVTQDYIMA TGDLVSSPLA AALDPRVDVE SVQEQMTPTP SDDEEDLGAD ALEDNDTDSE QQLTFEFDVN PEPTFIEAET NVLEESDLDT VKTA
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