Gene Shewana3_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0699 
Symbol 
ID4476909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp815712 
End bp817136 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content53% 
IMG OID639725234 
Productmajor facilitator transporter 
Protein accessionYP_868343 
Protein GI117919151 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000337729 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00021718 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAATC CGCTACGCAC TTTCGCCTCT TTATATAGCA CGACTCTATT AACTGTGTTG 
GCAGGCGGTT TACTCACCAC CTATTTAGGC CTGCGCCTGT CGGTGATGCA CGTTCCACAG
TTATGGATAG GCGGCATGAT GTCGGCCTAT TACGTCGGTC TGGTGGCAGG CTCTAAGATA
GGTCACCGTT TGATTGCCCA AGTCGGGCAT ATTCGCGCCT TTGTCGCCAG CGCAGGAATA
GTGGCCGCCT CCGCACTCGG CCACGCCTTA GTGGATGAGT TAGCGGTTTG GATCCTTTTA
AGGCTTATCG TCGGTATGGG CATGATGTGC CAATACATGG TGCTTGAAAG CTGGCTCAAT
GAGCAGGCCG AAAGCAGCCA ACGCGGCATT GTGTTCGCCA GCTACATGAT AGTCTCGTAT
TTCGGTTTGA TATTGGGCCA AGGTGCCATC AGCCTCTATC CTGAACTCGG CCTAGAGCCG
CTGTTACTGA TCGCCATCTG TTTTGCCCTG TGTATTGTCC CCATTTCCTT GACCCGCCGT
ATTCACCCTG CGCCACTGGT ACCCGCGCCC TTAAAAATCG CCCATTATTG GCGCAAAGCC
CCGCAAGCAC TGACGACTAT TGCGATAGGT AGCATGATTG TCGGCTCCTT TTACGGCTTG
GCGCCCGCCT ATGCGAGTAA CTTAGGTTTA CCACCCGAGA AAGTCGCCAC CTATATGACG
GCCACCATTC TTGCGGGTCT GCTGGCGCAA TGGCCGATGG GGAAATTATC CGACATTATG
TCCCGCAGCC GGCTTATCCG CATTAACTGC GTATTGCTTG GGATCTTAGC GTTAGCTATC
GCCCTCACGC CTTACCACCC CACACTCTCA CTGGTGATGA CGTTTCTGTT CGGTATTCTT
GGTTTTACCT TCTACCCTTT GGCGACGGCA CTGGCCAACT CCCGTGTCGA GCAGAGCGAA
AGGGTCGGTC TGTCGGCCAC CATATTACTG ACCTTCGGTC TTGGCGCCAG TATAGGTCCG
CTTATCGCCT CAACCCTAAT GCAATGGCTC GGCAATAGCA TGCTCTATGG CTTTATGTCG
GCCTGTACCT TAATTCTGTT TTTACGCCTG CGTTATGTTC ACTCACAACA AAAGGCCGAA
ACCAATGTGA CTCAAGACTA CATCATGGCA ACCGGTGACT TAGTCTCATC CCCCTTGGCG
GCCGCGCTCG ACCCAAGGGT TGATGTCGAA TCGGTGCAGG AGCAAATGAC CCCCACGCCC
AGCGACGATG AAGAAGATTT AGGTGCCGAT GCCCTCGAGG ATAATGACAC TGACAGCGAA
CAACAGCTGA CATTCGAGTT TGACGTTAAT CCAGAGCCGA CTTTTATTGA GGCAGAAACG
AACGTTCTCG AAGAGTCAGA TCTCGATACG GTGAAAACCG CTTAA
 
Protein sequence
MANPLRTFAS LYSTTLLTVL AGGLLTTYLG LRLSVMHVPQ LWIGGMMSAY YVGLVAGSKI 
GHRLIAQVGH IRAFVASAGI VAASALGHAL VDELAVWILL RLIVGMGMMC QYMVLESWLN
EQAESSQRGI VFASYMIVSY FGLILGQGAI SLYPELGLEP LLLIAICFAL CIVPISLTRR
IHPAPLVPAP LKIAHYWRKA PQALTTIAIG SMIVGSFYGL APAYASNLGL PPEKVATYMT
ATILAGLLAQ WPMGKLSDIM SRSRLIRINC VLLGILALAI ALTPYHPTLS LVMTFLFGIL
GFTFYPLATA LANSRVEQSE RVGLSATILL TFGLGASIGP LIASTLMQWL GNSMLYGFMS
ACTLILFLRL RYVHSQQKAE TNVTQDYIMA TGDLVSSPLA AALDPRVDVE SVQEQMTPTP
SDDEEDLGAD ALEDNDTDSE QQLTFEFDVN PEPTFIEAET NVLEESDLDT VKTA