Gene Shewana3_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0698 
Symbol 
ID4476908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp814902 
End bp815642 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID639725233 
Product23S rRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_868342 
Protein GI117919150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000126768 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000148247 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAC AAGATATTAT TTTTGGGATC CACGCGGTTG AAGCGCTGTT AAAACACAGC 
CCTGAGCGCA TTATTGAACT TTGGCTGCTG CAGGGCCGTG AAGATGAGCG TTTAACGCCG
CTGATCCGCC AGGCTAAAGC CTTTGGCACT AGCATCCAAG TGACCTCACG CAAAGTATTG
GACGATAAAG CCGAAAGTGC TCAGCACCAA GGCATTGTTG CCCGTGTTAA GGCGGCTAAA
ATCCTTGGTG AGCATGACTT AGATGAGTTG TTAGGTAAGA CCGATTTACC ATTTTTATTG
ATTTTAGATG GTGTTACCGA TCCGCATAAC CTAGGTGCTT GCTTACGTAA CGCCGATGCT
GCGGGTGTGC AGGGCATTAT TGTGCCTAAG GACAACTCAG TAGGCTTAAC GGCTGTGGTG
AGTAAAGTGG CCTGCGGCGC CGCCGAAACT GTGCCCTTAT TCCAAGTGAC TAACCTTGCG
CGTACCATGC GTCATCTGCA GGAAAAGGGC GTGTGGATTG TTGGCACGGC AGGCGAAGCG
GATTGTGAGT TATATCAAGC CGATCTTAAA GGGCCGCTGG CGATTGCGAT GGGCGCCGAA
GGCAAAGGCT TACGCCGCTT AAGTCGTGAA TGTTGTGATA CCTTGGTTTC GATTCCGATG
GCGGGTAGCG TTTCTAGCTT AAACGTGTCG GTCGCAACGG GTATCTGCCT ATTCGAAGCC
GTGCGTCAAC GCCGTAGCTA A
 
Protein sequence
MKKQDIIFGI HAVEALLKHS PERIIELWLL QGREDERLTP LIRQAKAFGT SIQVTSRKVL 
DDKAESAQHQ GIVARVKAAK ILGEHDLDEL LGKTDLPFLL ILDGVTDPHN LGACLRNADA
AGVQGIIVPK DNSVGLTAVV SKVACGAAET VPLFQVTNLA RTMRHLQEKG VWIVGTAGEA
DCELYQADLK GPLAIAMGAE GKGLRRLSRE CCDTLVSIPM AGSVSSLNVS VATGICLFEA
VRQRRS