Gene Shewana3_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0692 
SymbolrplM 
ID4476902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp809168 
End bp809596 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content46% 
IMG OID639725227 
Product50S ribosomal protein L13 
Protein accessionYP_868336 
Protein GI117919144 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000556575 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000194665 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGACTT TTACTGCTAC ACCAGAAACT GTAACTCGTG ACTGGTTCGT CGTTGATGCT 
GACGGCAAAA CTTTAGGTCG TATCGCTACC GAAATCGCTC TGCGTTTACG CGGTAAGCAC
AAGCCAGAAT ACACTCCTCA CGTTGACACT GGTGATTACA TCATCGTTAT CAACGCTGAG
AAAGTTACTG TTACTGGTAA CAAAGCGCAA GGCAAGACGT ACTACTCGCA CTCAGGCTTC
CCTGGTGGCA TCAAGCAAAT CAGCTTTGAA AAGCTGCAAG CTCACAAGCC AGAAATGATC
ATCGAGAAAG CAGTTAAGGG TATGTTACCA AAAGGTCCTC TGGGCCGTGC CATGTTCCGT
AAACTGAAAG TTTACGCTGG CGCAGAACAT AACCACGCTG CACAACAACC TCAAGTTCTT
GATATCTAA
 
Protein sequence
MKTFTATPET VTRDWFVVDA DGKTLGRIAT EIALRLRGKH KPEYTPHVDT GDYIIVINAE 
KVTVTGNKAQ GKTYYSHSGF PGGIKQISFE KLQAHKPEMI IEKAVKGMLP KGPLGRAMFR
KLKVYAGAEH NHAAQQPQVL DI