| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0690 |
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| Symbol | |
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| ID | 4476900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 805950 |
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| End bp | 807302 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725225 |
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| Product | peptidase Do |
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| Protein accession | YP_868334 |
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| Protein GI | 117919142 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0142597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000515523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACGA AACTATCTGT ACTTTCAGCC GCAATGTTAG CCGCAACTCT GACAATGATG
CCCGCTGTCT CACAGGCCGC TATTCCGCAA TCTGTTGAGG GTCAATCCAT TCCAAGTCTT
GCGCCTATGT TAGAGCGCAC GACGCCCGCC GTGGTTTCCG TGGCGGTATC TGGCACGCAC
GTCTCCAAAC AACGTGTACC CGATGTGTTC CGTTATTTCT TCGGCCCCAA TGCACCGCAG
GAACAAGTGC AAGAACGTCC TTTTAGAGGC TTAGGCTCAG GTGTGATTAT CGACGCAGAT
AAAGGTTATA TCGTCACCAA CAACCATGTG ATCGACGGTG CCGATGATAT CCAGGTCGGT
CTGCACGATG GCCGCGAAGT CAAAGCCAAG CTGATTGGTA CCGACTCAGA GTCCGACATT
GCCTTGCTGC AAATTGAAGC GAAAAATCTA GTCGCGATCA AGACCTCTGA TTCTGATGAA
CTACGTGTGG GTGACTTTGC AGTAGCCATC GGTAACCCCT TTGGTTTGGG TCAAACCGTC
ACCTCAGGGA TCGTCAGCGC CCTAGGCCGT AGCGGTTTAG GCATTGAAAT GCTTGAAAAC
TTTATCCAAA CCGACGCAGC GATTAACAGC GGCAACTCGG GTGGTGCGCT GGTTAACCTG
AAAGGTGAAC TGATCGGTAT TAACACCGCC ATCGTAGCCC CAGGCGGTGG TAACGTAGGT
ATCGGTTTTG CGATCCCTGC CAATATGGTG AAAAACCTCG TGGCACAAAT TGCCGAGCAC
GGTGAAGTTC GCCGTGGCGT GCTGGGGATT TCGGGACGCG ACTTGGATAG CCAACTCGCC
CAAGGTTTTG GTTTAGATAC CCAGCACGGT GGTTTTGTGA ATGAAGTCAC CGCGGGCAGC
GCCGCTGAAA AAGCCGGCAT CAAGGCGGGT GATATTATCG TCAGCGTCGA TGGCCGTGCG
ATTAAATCCT TCCAAGAGCT ACGTGCGAAA GTCGCGACTA TGGGCGCGGG TGCCAAGGTT
GAACTAGGAC TTATCCGCGA TGGCGATAAG AAAACCGTGA ATGTCACCTT AGGTGAAGCA
AGCCAAACCA CTGAAAAAGC AGCAGGTGCT GTGCACCCAA TGCTACAAGG TGCCTCGCTA
GAAAACGCTT CGAAAGGGGT GGAAATTACT GAGGTGGCAC AAGGCTCACC TGCGGCAATG
AGTGGCTTAC AAAAAGGCGA TGTGATTGTC GGCATTAACC GTTCGGCGGT GAAAGATCTG
AAATCACTCA AGGAGCAGCT CAAAGATCAA GAAGGCGCTG TCGCCCTGAA GATCCTCCGT
GGTAAGAGCT TGTTGTACTT AGTGCTGCGT TAA
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| Protein sequence | MKTKLSVLSA AMLAATLTMM PAVSQAAIPQ SVEGQSIPSL APMLERTTPA VVSVAVSGTH
VSKQRVPDVF RYFFGPNAPQ EQVQERPFRG LGSGVIIDAD KGYIVTNNHV IDGADDIQVG
LHDGREVKAK LIGTDSESDI ALLQIEAKNL VAIKTSDSDE LRVGDFAVAI GNPFGLGQTV
TSGIVSALGR SGLGIEMLEN FIQTDAAINS GNSGGALVNL KGELIGINTA IVAPGGGNVG
IGFAIPANMV KNLVAQIAEH GEVRRGVLGI SGRDLDSQLA QGFGLDTQHG GFVNEVTAGS
AAEKAGIKAG DIIVSVDGRA IKSFQELRAK VATMGAGAKV ELGLIRDGDK KTVNVTLGEA
SQTTEKAAGA VHPMLQGASL ENASKGVEIT EVAQGSPAAM SGLQKGDVIV GINRSAVKDL
KSLKEQLKDQ EGAVALKILR GKSLLYLVLR
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