Gene Shewana3_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0690 
Symbol 
ID4476900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp805950 
End bp807302 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content52% 
IMG OID639725225 
Productpeptidase Do 
Protein accessionYP_868334 
Protein GI117919142 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000515523 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACGA AACTATCTGT ACTTTCAGCC GCAATGTTAG CCGCAACTCT GACAATGATG 
CCCGCTGTCT CACAGGCCGC TATTCCGCAA TCTGTTGAGG GTCAATCCAT TCCAAGTCTT
GCGCCTATGT TAGAGCGCAC GACGCCCGCC GTGGTTTCCG TGGCGGTATC TGGCACGCAC
GTCTCCAAAC AACGTGTACC CGATGTGTTC CGTTATTTCT TCGGCCCCAA TGCACCGCAG
GAACAAGTGC AAGAACGTCC TTTTAGAGGC TTAGGCTCAG GTGTGATTAT CGACGCAGAT
AAAGGTTATA TCGTCACCAA CAACCATGTG ATCGACGGTG CCGATGATAT CCAGGTCGGT
CTGCACGATG GCCGCGAAGT CAAAGCCAAG CTGATTGGTA CCGACTCAGA GTCCGACATT
GCCTTGCTGC AAATTGAAGC GAAAAATCTA GTCGCGATCA AGACCTCTGA TTCTGATGAA
CTACGTGTGG GTGACTTTGC AGTAGCCATC GGTAACCCCT TTGGTTTGGG TCAAACCGTC
ACCTCAGGGA TCGTCAGCGC CCTAGGCCGT AGCGGTTTAG GCATTGAAAT GCTTGAAAAC
TTTATCCAAA CCGACGCAGC GATTAACAGC GGCAACTCGG GTGGTGCGCT GGTTAACCTG
AAAGGTGAAC TGATCGGTAT TAACACCGCC ATCGTAGCCC CAGGCGGTGG TAACGTAGGT
ATCGGTTTTG CGATCCCTGC CAATATGGTG AAAAACCTCG TGGCACAAAT TGCCGAGCAC
GGTGAAGTTC GCCGTGGCGT GCTGGGGATT TCGGGACGCG ACTTGGATAG CCAACTCGCC
CAAGGTTTTG GTTTAGATAC CCAGCACGGT GGTTTTGTGA ATGAAGTCAC CGCGGGCAGC
GCCGCTGAAA AAGCCGGCAT CAAGGCGGGT GATATTATCG TCAGCGTCGA TGGCCGTGCG
ATTAAATCCT TCCAAGAGCT ACGTGCGAAA GTCGCGACTA TGGGCGCGGG TGCCAAGGTT
GAACTAGGAC TTATCCGCGA TGGCGATAAG AAAACCGTGA ATGTCACCTT AGGTGAAGCA
AGCCAAACCA CTGAAAAAGC AGCAGGTGCT GTGCACCCAA TGCTACAAGG TGCCTCGCTA
GAAAACGCTT CGAAAGGGGT GGAAATTACT GAGGTGGCAC AAGGCTCACC TGCGGCAATG
AGTGGCTTAC AAAAAGGCGA TGTGATTGTC GGCATTAACC GTTCGGCGGT GAAAGATCTG
AAATCACTCA AGGAGCAGCT CAAAGATCAA GAAGGCGCTG TCGCCCTGAA GATCCTCCGT
GGTAAGAGCT TGTTGTACTT AGTGCTGCGT TAA
 
Protein sequence
MKTKLSVLSA AMLAATLTMM PAVSQAAIPQ SVEGQSIPSL APMLERTTPA VVSVAVSGTH 
VSKQRVPDVF RYFFGPNAPQ EQVQERPFRG LGSGVIIDAD KGYIVTNNHV IDGADDIQVG
LHDGREVKAK LIGTDSESDI ALLQIEAKNL VAIKTSDSDE LRVGDFAVAI GNPFGLGQTV
TSGIVSALGR SGLGIEMLEN FIQTDAAINS GNSGGALVNL KGELIGINTA IVAPGGGNVG
IGFAIPANMV KNLVAQIAEH GEVRRGVLGI SGRDLDSQLA QGFGLDTQHG GFVNEVTAGS
AAEKAGIKAG DIIVSVDGRA IKSFQELRAK VATMGAGAKV ELGLIRDGDK KTVNVTLGEA
SQTTEKAAGA VHPMLQGASL ENASKGVEIT EVAQGSPAAM SGLQKGDVIV GINRSAVKDL
KSLKEQLKDQ EGAVALKILR GKSLLYLVLR