| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0689 |
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| Symbol | |
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| ID | 4476899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 804742 |
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| End bp | 805824 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725224 |
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| Product | DegS serine peptidase |
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| Protein accession | YP_868333 |
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| Protein GI | 117919141 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0549825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000493421 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAATAA AAGAAACCCT GTTATATCTC GGTAAAGCCG TGCTCTTCGG CCTTATCATG
GCGGCCATGT TTTTGTTAGT TACACACTAC TTCGACAATA AGAATCTCGG CAGCTCGTTA
CTGCAAAACC GGGGTAATAA CACGGTCGAA CTCTCCTTTG CTAAGGCCGT ACGCCGCGCC
GCTCCTGCCG TAGTCAATAT TTATAGCTTA AGTATTGATC AGAACCGTCC GCTAAACTCT
GGCTCCCTCC AAGGCCTAGG CTCAGGGGTG ATCATGAGCA AAGAAGGCTA TATTCTCACG
AATTATCATG TGATTAAAAA AGCTGATGAA ATTGTGGTCG CCCTGCAGGA TGGCCGCAAA
TTCACCTCGG AAGTCGTCGG TTTTGATCCA GAAACCGATC TTTCAGTGCT TAAGATCGAA
GGCGATAATC TTCCTACGGT GCCAGTCAAT CTCGACAGCC CACCGCAGGT TGGGGATGTG
GTATTAGCGA TTGGTAACCC TTATAACCTC GGCCAAACCA TTACCCAAGG CATTATCAGC
GCCACGGGTC GTAACGGCTT AAGTTCTGGT TATTTAGACT TCTTACAGAC AGATGCTGCA
ATTAACGCCG GTAACTCAGG CGGCGCCTTA ATCGACACTA ACGGTAGCCT GATTGGTATC
AACACCGCCG CCTTCCAAGT GGGCGGTGAA GGTGGCGGCC ACGGGATTAA CTTCGCGATC
CCGATTAAAC TGGCCCACAG CATTATGGGT AAACTGATTA AAAATGGTCG AGTGATCCGT
GGTGCCTTAG GGATATCTGG CGAACCGATT AACCCTGTTG TGGCGCAAAT CCTCAACCTA
CCCGATTTAC GTGGGGTATT AGTCACAGGC GTCGATCCTA ATGGCCCTGC GGCACGGGCG
CATCTACAAC CAAGGGATGT GATCATCAAA TACGATGGCG AAGATGTGCC AGGGGTCGAA
ATGCTGATGG ATAGAATTGC CGAAACTACG CCCGGCAAGA AAATCATGAT GACGGTTATC
CGCCAAGGCA AAGAGCAAGT ATTGCCGGTG ATTATCGATG AAAAGGTCGT CGTCGATAAT
TAA
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| Protein sequence | MTIKETLLYL GKAVLFGLIM AAMFLLVTHY FDNKNLGSSL LQNRGNNTVE LSFAKAVRRA
APAVVNIYSL SIDQNRPLNS GSLQGLGSGV IMSKEGYILT NYHVIKKADE IVVALQDGRK
FTSEVVGFDP ETDLSVLKIE GDNLPTVPVN LDSPPQVGDV VLAIGNPYNL GQTITQGIIS
ATGRNGLSSG YLDFLQTDAA INAGNSGGAL IDTNGSLIGI NTAAFQVGGE GGGHGINFAI
PIKLAHSIMG KLIKNGRVIR GALGISGEPI NPVVAQILNL PDLRGVLVTG VDPNGPAARA
HLQPRDVIIK YDGEDVPGVE MLMDRIAETT PGKKIMMTVI RQGKEQVLPV IIDEKVVVDN
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