Gene Shewana3_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0682 
Symbol 
ID4476892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp800258 
End bp800542 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content48% 
IMG OID639725217 
ProductSpoIIAA family protein 
Protein accessionYP_868326 
Protein GI117919134 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0924977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGAAT TTGTGCAACA GGGTAAAATT TGCCACCTCA AAGGGCGTTT ATCACAGGAG 
CAAGTGGTCG CACTTTGGCC GCAAAGGCAG AGCCTGTTAA GCCAAGATAC CCAAATGTTG
TCGCTCACTG AGCTGGAGTA CAGCGACAGT GCTGGCGTGG CATTTTTGCT GGCGTTAGTG
CGTCAGCATG GCACGCCATT GCAGTTGTGC TCAGCGTCGG ATCAGCTAAA AAAATTAATC
GATTTATATG ATTTACAGTC CTTCTTCACC GAAGAAGCGA ATTGA
 
Protein sequence
MVEFVQQGKI CHLKGRLSQE QVVALWPQRQ SLLSQDTQML SLTELEYSDS AGVAFLLALV 
RQHGTPLQLC SASDQLKKLI DLYDLQSFFT EEAN