Gene Shewana3_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0680 
Symbol 
ID4476890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp799114 
End bp799587 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID639725215 
Producthypothetical protein 
Protein accessionYP_868324 
Protein GI117919132 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.665426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0968495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACAC GAAAAATTGA ATTATTAGTG GGTATGTTTC TCTTAACGGG CTTAGCGGCC 
TTTTTGGTGT TGGTGTTTAA AGTCGCCAAT ATCGAAGTGC AGACCAGCGA CAGCAGCTAT
ACCCTCACCG CCAACTTCAC CAATATCGGT GGCTTAAAGG TACGCTCTCC GGTCAAGGTC
GGCGGCGTAG TGGTTGGCCG CGTGAGTAAG ATAGATTTAG ACCCAGTCAA ACTGGTGGCT
GTGGTGACGA TTGTAATGGA CAAGCGTTTC GATAAATTCC CTGAAACCAG TAGCTTAGCT
ATTTTAACTT CAGGTTTACT CGGTGAGCAG TTCCTCGGAT TAACACCGGG CTTTGTCGAT
GATGACGTGA GTATGCTTAA GGATGGCGAC AAGATTGACG ATACTCGCTC CGCATTAGTG
TTAGAAGATC TGATTGGTCA GTTCTTATAT AGTATGGGTT CAAAGGATAA ATAG
 
Protein sequence
MLTRKIELLV GMFLLTGLAA FLVLVFKVAN IEVQTSDSSY TLTANFTNIG GLKVRSPVKV 
GGVVVGRVSK IDLDPVKLVA VVTIVMDKRF DKFPETSSLA ILTSGLLGEQ FLGLTPGFVD
DDVSMLKDGD KIDDTRSALV LEDLIGQFLY SMGSKDK