Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0673 |
Symbol | |
ID | 4476883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 793545 |
End bp | 794276 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725208 |
Product | ABC transporter related |
Protein accession | YP_868317 |
Protein GI | 117919125 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.207873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0972351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAAA TCACCTTAAA AGCACAAAAT CTCGCTAAGA GTTATAAGAG TCGTCAGGTT GTGAAAGATG TCAGCCTGAC GGTGAAAACG GGTCAAGTCG TCGGCCTACT CGGCCCAAAC GGCGCGGGTA AAACCACCAC CTTTTACATG GTCGTGGGCT TAGTCAAAAG CGATAAAGGC CATATCTTTA TCGACGATGA TGATTTAACC GCCGATCCCA TGCACCTGCG CGCCCGCAAA GGCATTGGTT ACCTGCCACA GGAAGCCAGT ATCTTTCGCA AGCTGACCGT GCACGACAAT ATCATGGCGG TACTGCAAAC CCGTAAAGAG CTCAATCGCG ACCAACGCGA AGAAGAGCTG GAACATCTGC TCGAAGAGTT CCATATCACC CATATTCGCG ATAGCCAAGG CATGTCGTTA TCGGGCGGTG AACGTCGCCG CGTCGAAATT GCCCGCGCCT TAGCGGCCAA TCCTAAGTTT ATTCTGCTCG ATGAACCCTT CGCCGGTGTC GACCCGATTT CGGTTATCGA TATCAAGAAA ATCATCGAAC AACTTAAGAG TCGAGGCCTT GGGGTACTGA TCACAGACCA CAATGTGCGC GAAACCTTAG ACGTCTGTGA ACATGCCTAC ATTGTCAGTC ACGGAAACCT GATTGCCGAA GGAACTCCCG CAGAGATCTT AGACAATCAG CAAGTTAGGG CTGTGTACTT AGGTGAACAA TTCAGGCTAT AG
|
Protein sequence | MTQITLKAQN LAKSYKSRQV VKDVSLTVKT GQVVGLLGPN GAGKTTTFYM VVGLVKSDKG HIFIDDDDLT ADPMHLRARK GIGYLPQEAS IFRKLTVHDN IMAVLQTRKE LNRDQREEEL EHLLEEFHIT HIRDSQGMSL SGGERRRVEI ARALAANPKF ILLDEPFAGV DPISVIDIKK IIEQLKSRGL GVLITDHNVR ETLDVCEHAY IVSHGNLIAE GTPAEILDNQ QVRAVYLGEQ FRL
|
| |