| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0671 |
|---|
| Symbol | |
|---|
| ID | 4476881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 791648 |
|---|
| End bp | 791935 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639725206 |
|---|
| Product | sigma 54 modulation protein / SSU ribosomal protein S30P |
|---|
| Protein accession | YP_868315 |
|---|
| Protein GI | 117919123 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00493763 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0864214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAA ACCTGAGTGG ACACCATATC GAGATTACTG AATCGTTACG GGCTTATGTT
GAGGAAAAGT TTTCAAAACT TGAACGTCAT TTCGAACAGA TCAATAATGT GCACGTTGTG
CTCAATGTTG AGAAAATGCA ACAAATTGCC GAAGCGAGAA TCAACCTCAC CGGTGGTGAA
GTCTTCGCGA CTTCAGAGCA TGCAGATATG TATGCTGCCA TAGACGTCCT GATCGACAAG
CTTGATCGTC AGGTTATTAA ACACAAAGAG AAGTTAACAA AACACTAG
|
|---|
| Protein sequence | MQINLSGHHI EITESLRAYV EEKFSKLERH FEQINNVHVV LNVEKMQQIA EARINLTGGE
VFATSEHADM YAAIDVLIDK LDRQVIKHKE KLTKH
|
|---|
| |