| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0658 |
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| Symbol | nrfA |
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| ID | 4476868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 778296 |
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| End bp | 779717 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725193 |
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| Product | cytochrome c552 |
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| Protein accession | YP_868302 |
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| Protein GI | 117919110 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | [TIGR03152] formate-dependent cytochrome c nitrite reductase, c552 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.034848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.165673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACG GAGATGAGAT GATGAAGAAG ATGACAGGTA AGTCCTTTGC ACTCAGTGCA
TTGGTTGCCG CGAGCTTCAT GGCGGCGGGT GCGATGGCAA GCGATAAGAC CGAGCCACGC
AACGAAGTAT ACAAAGATAA GTTTGCTAAT CAATACAATA GCTGGCATGA CACCGCAAAA
AGTGAAGAGA TCACCGACGC ATTAGCGGGC GATCCTAGCT TAGTAATTCT GTGGGCCGGT
TATGGTTTCG CAAAAGACTA CAACGCACCT CGCGGCCACA TGTATGCCGT GACTGACGTT
CGTAACACCC TACGTACTGG CGCACCAGCC AATGCCGAAG ACGGCCCAAT GCCAATGGCA
TGTTGGAGCT GTAAGAGCCC TGATGTACCT CGTCTGATCG AAGAACAAGG CGAAGAGGGT
TACTTCAAAG GCAAGTGGGC TAAAGGTGGT CCAGAAGTCG TTAACACTAT CGGTTGTAGC
GACTGCCACG AAAAAGGCAC CCCAAAACTA CGCATTTCAC GTCCATTCGC TGAGCGCGCA
ATGGAAACTA TCGGCACACC ATTCGACAAA GCTTCGAAGA AAGACAAGCA ATCTATGGTT
TGCGGTCAGT GCCACGTTGA ATACTATTTC GAGAAGAAAG ACGATCGCAA AGGTTTCGTA
AAATTCCCAT GGGATTCAGG TACTACTGTT GAACAAATGG AAGCTTACTA CGATGCTATC
GAGTTCTCTG ACTGGACTCA TGCGCTGTCT AAGACACCAA TGCTGAAGGC ACAACACCCT
GGTTATGAAA CTTGGAAACT GGGCGTACAC GGTAAGAATG ATGTGAGCTG TGTTGACTGT
CACATGCCTA AAGTGACTAA CGACAAAGGT CGTAAGTACA CAGATCATAA AGTGGGTAAC
CCATTCGATC GCTTCGACGA AACCTGTGCA ACTTGCCATA GCCAAAGCAA AGAGTTCTTA
GAAGGCATCA CTAAAGAGCG TTATGCCAAA GTGAAAGAGC TGAAAGCTCG CGCTGAAGGT
CAATTAGTGA AAGCACACTT CGAAGCCGCT AAAGCGTGGG AAGTGGGTGC CACCGAAGCT
GAAATGAAGC CAATCCTGAC TGATATCCGT CACGCTCAAT GGCGCTGGGA CTTCGCGATT
GCTTCTCACG GTGTTGCGGC TCACGCGCCA GAAGAAGCAC TGCGTATCCT AGGTACTGCG
GTTGATAAAG CGGCTGATGC TCGCGTGAAA TTAGCCCAAT TACTGGCGAA GAAAGGCGTG
ACTGACGCGG TTGCTATCCC TGATATCTCT ACCAAAGCGA AAGCTCAAGC TGCACTGGGT
ATGGACATGG ACAAGATGAA TGCAGAGAAA GAAGCATTCA AGAAAGACGT GTTACCTAAG
TGGGATGAAG AAGCGAAAAA ACGCGAAGCA ACTTACAAGT AA
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| Protein sequence | MQHGDEMMKK MTGKSFALSA LVAASFMAAG AMASDKTEPR NEVYKDKFAN QYNSWHDTAK
SEEITDALAG DPSLVILWAG YGFAKDYNAP RGHMYAVTDV RNTLRTGAPA NAEDGPMPMA
CWSCKSPDVP RLIEEQGEEG YFKGKWAKGG PEVVNTIGCS DCHEKGTPKL RISRPFAERA
METIGTPFDK ASKKDKQSMV CGQCHVEYYF EKKDDRKGFV KFPWDSGTTV EQMEAYYDAI
EFSDWTHALS KTPMLKAQHP GYETWKLGVH GKNDVSCVDC HMPKVTNDKG RKYTDHKVGN
PFDRFDETCA TCHSQSKEFL EGITKERYAK VKELKARAEG QLVKAHFEAA KAWEVGATEA
EMKPILTDIR HAQWRWDFAI ASHGVAAHAP EEALRILGTA VDKAADARVK LAQLLAKKGV
TDAVAIPDIS TKAKAQAALG MDMDKMNAEK EAFKKDVLPK WDEEAKKREA TYK
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