Gene Shewana3_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0635 
Symbol 
ID4476845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp748128 
End bp748883 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID639725170 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_868279 
Protein GI117919087 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000753763 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAAGA GTAAACGTCA GTTTCTCGGA AAAATGGCCA GTGTGAGCGT CGGCGCCGCG 
CTCATTCCCG TCGTGCAAGT GCAAGCCCAA CCGGCTCAAA CTGCAACTAC GAGTAAACGC
TACGGCATGG TGATTGATCT GCGCCGCTGC GTCGGCTGTC AGGCCTGTAC CGTGGCGTGC
ACCTTCGAAA ACCTGCCACC CTTGGGGCAA TTTCGTACCA CAGTGCAGCA ATACGAAGTG
TCGCAACAGG ATTCTGCTAC GCCGCCCGCA TTTTTGATGT TGCCAAGACT GTGTAATCAC
TGTGAAAACC CGCCTTGCAT CCCAATTTGC CCCACGGGTG CCACCTTCCA ACGCCCAGAT
GGCATTGTGG TCGTCAACAA CGAATGGTGC GTCGGTTGTG GCTATTGTGT ACAAGCTTGC
CCCTACGATG CGCGCTTTAT CAACCATGAG ACCAACACAG CCGATAAATG CACCTTCTGC
GCACACAGGC TCGAAGCTGG ACTCTTACCC GCCTGTGTCG AAACCTGTGT CGGCGAAGCA
AGGGTGATTG GCGATCTAAA CGATCCTCAC AGCCACATAA GCCAGTTACT CAAGGCTAAT
CAAGCGGATA TCAAGGTGCT CAAGCCCGAT GCCAATACAG CACCTAGAGT GTTTTACATC
GGCATGAACA GCGCCTTTGA AGATCGCATT AACGGCCAAG CCCCCGTTCG CACCCTACTG
ACAGACTCTG GCGAGGAGAT CCACCATGGT CATTAA
 
Protein sequence
MDKSKRQFLG KMASVSVGAA LIPVVQVQAQ PAQTATTSKR YGMVIDLRRC VGCQACTVAC 
TFENLPPLGQ FRTTVQQYEV SQQDSATPPA FLMLPRLCNH CENPPCIPIC PTGATFQRPD
GIVVVNNEWC VGCGYCVQAC PYDARFINHE TNTADKCTFC AHRLEAGLLP ACVETCVGEA
RVIGDLNDPH SHISQLLKAN QADIKVLKPD ANTAPRVFYI GMNSAFEDRI NGQAPVRTLL
TDSGEEIHHG H