| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0623 |
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| Symbol | |
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| ID | 4476833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 730638 |
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| End bp | 732932 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725159 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_868268 |
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| Protein GI | 117919076 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.494369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTA AGACGACAAA AAAAGCGAAA GCGAAGCGCA GCCGTGGCCT GTTTGGGCAA
ATTTGGTCGC TCACTTGGAA ACTAGCCTTA ATCGGCCTAG CCGTTGTGAC CTTCTACAGT
ATTTACCTCG ATCAAATTAT TGCCCGCAAG TTTGAGGGGC AAAAATGGCA CTTACCCGCG
CAGGTATTTA GCCGCTCGAT GGCCTTATAT CCCGGCGCTG CCGTGAGTCA TCCACAGTTA
ATGGCCGAAC TCAAACTCTT AGGTTATCGC AAAGTCGCCA ATCCCCGTGA GGTGGGTGAG
TTCTCTGCAT CCAGCACCAA AATCGAATTA TGGCGTCGTC CCTTCTTACA TCCTGAGGGC
GATCAGGCCG AGCAGCGAGT GATGATTAGC TTCGACAGCG ATGGGATCAG CTCGATTGCA
CGTATGTCAG ATAAGCGCCA GTTGGCGGTA TTCCATTTAG AACCCGTCTT GCTCGACCGC
ATTATTGCGG GTGACGGCGA AGACAGATTG TTTGTTCCCA CAGAAGAAAT GCCTAAGGCG
ATTGTAAAAG CCTTGCTGCT GGTGGAAGAC CGCAGTTTTT ACGAACATCA CGGGGTTAAT
CCCTTCGCGA TTCTGCGTGC CGCTTTTGTG AATATCAGTG CGGGTCGTAC CGTACAGGGC
GGCTCGACAC TGACCCAGCA GTTGGCGAAA AACTTCTTCC TCTCGAGCGA GCGCTCTTTG
CTGCGTAAAA TTCGCGAAGC TTTAATGGCG GTGATTATCG ATTTTCGTTA CAGCAAGGAA
GAAATCCTCG AGGCCTACCT CAACGAAGTG TATATGGGGC AAGATAAATC CCGCGCCGTG
CATGGTATGG GGCTGGCTTC ACAGTTCTAT TTTGGTCGAC CCATCGGCGA GCTAACCACG
GCGCAGCAAG CGTTTTTAGT GGCGGCGATT AAGGGGCCTT CCTATTACAA CCCATGGCGT
TATCCTGAGC GCAGCCAAGA GCGTCGCGAT TTAGTACTGC GTCTCTTGAT GGAGTCGGGT
GAGCTGAGCA CTGCGCAATA CAAGGTTGCG GTAGAGTCGC CACTAGGCTT GCGTAATCCC
AATAAACCAG TGCATCAAAA ATTACCTGCG TTCTATGCCT TGGTTAAACA AGAGCTTAAC
GAGCGTTATG GCGATGCGTT ATTAAAGCAA TCTGGGGTGA AGATTTACAC CACACTCGAT
CCAATGGCGC AGGAAGCCGC CGAAATCGCC GTGACTCAAA CCTTTAAGAG CTTAGATAAA
GGCAATAAGT CGTTGCAGAT TGGTATGGTC GTGACGGACA AATACACTGG CGGTATCGCA
GCTATGGTGG GTGATAAGAC GCCTGGCTTT GATGGCTATA ACCGCGCGGT TGAGATCCGC
AGACCCATAG GCTCGCTCAT CAAACCATTT GTGTACGCCA CCGCTTTGGC ACCGAATAGC
CAGTTTACCT TGGCTTCGCC ACTTAAAGAT CAGCCGATTA CCCTAAAGAA TGAGCAGGGC
AAAACCTGGT CACCGCAGAA CTTTGATAAG AAGTTTAGTG GACAAGTCTC GTTATTAACG
GCGCTGAAAA AGTCGATGAA CGTACCTACG GTGAACCTCG GGATTGCCGT GGGGGTGGAT
GCGGTGGCAA CCACCTTGGC TAAGTCGGGC TGGCAAGAGC CGCTTAACGA ATATCCGTCT
ATGCTACTGG GCGCCGTGAA TGGCTCGCCC TTAATGGTAG CACAGGTTTA TCAGACGCTG
GCCGATTATG GTGCCTATCG CAAACTCACC ACAGTGACGG CGGTGCTGGA CAGTCACAAT
CAGCCGTTAC CTGTGACCCG CTCACCGAAG GAGCAAGCTA TTACGCCGGA TACTGATTTC
TTGGTGCAAT ATGCCATGCA GCAAGTGGTG CGCTCGGGGA CTGCAACACG TTTAGGTAAT
GCCTTCCCAG GCGTTGCTCT GGCGGGTAAA ACCGGTACCA GTAACGATAG CCGCGACTCT
TGGTTCGCCG GTTTTGACGA GCGTAACGTC GCGGCGATTT GGGTCGGACG CGACGATAAC
GGCAAGACCA GCCTCTACGG TAGCAGTGGC GCCATGGCGG TGTATCAAGC CTTCTTGAAG
GAGCGTCCAC CGATTGGGCT ACGCTCGATT CCGCCAACGG GCGTGATCCA AGGTTACTTT
GACCGTGATA CCGGTGAAGC TAAGGAGGCG GGATGCCGCA ATACCGAGGC ATTGCCAGCC
CTTAGAGGTA CCTATAATCC TGCGAAAAAC TGCGGTGAGC CGTTGCAGTG GTGGCAGAAG
ATTTTAGGTC AGTAA
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| Protein sequence | MTTKTTKKAK AKRSRGLFGQ IWSLTWKLAL IGLAVVTFYS IYLDQIIARK FEGQKWHLPA
QVFSRSMALY PGAAVSHPQL MAELKLLGYR KVANPREVGE FSASSTKIEL WRRPFLHPEG
DQAEQRVMIS FDSDGISSIA RMSDKRQLAV FHLEPVLLDR IIAGDGEDRL FVPTEEMPKA
IVKALLLVED RSFYEHHGVN PFAILRAAFV NISAGRTVQG GSTLTQQLAK NFFLSSERSL
LRKIREALMA VIIDFRYSKE EILEAYLNEV YMGQDKSRAV HGMGLASQFY FGRPIGELTT
AQQAFLVAAI KGPSYYNPWR YPERSQERRD LVLRLLMESG ELSTAQYKVA VESPLGLRNP
NKPVHQKLPA FYALVKQELN ERYGDALLKQ SGVKIYTTLD PMAQEAAEIA VTQTFKSLDK
GNKSLQIGMV VTDKYTGGIA AMVGDKTPGF DGYNRAVEIR RPIGSLIKPF VYATALAPNS
QFTLASPLKD QPITLKNEQG KTWSPQNFDK KFSGQVSLLT ALKKSMNVPT VNLGIAVGVD
AVATTLAKSG WQEPLNEYPS MLLGAVNGSP LMVAQVYQTL ADYGAYRKLT TVTAVLDSHN
QPLPVTRSPK EQAITPDTDF LVQYAMQQVV RSGTATRLGN AFPGVALAGK TGTSNDSRDS
WFAGFDERNV AAIWVGRDDN GKTSLYGSSG AMAVYQAFLK ERPPIGLRSI PPTGVIQGYF
DRDTGEAKEA GCRNTEALPA LRGTYNPAKN CGEPLQWWQK ILGQ
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