Gene Shewana3_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0617 
Symbol 
ID4476827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp722231 
End bp722866 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID639725153 
ProductcAMP-regulatory protein 
Protein accessionYP_868262 
Protein GI117919070 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000135204 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.325091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGA TTGGTAAGCC AAAACCAGAC CCAACTTTGG AATGGTTTTT ATCACACTGT 
CACATTCACA AGTATCCCGC TAAAAGCACC TTGATCCATG CTGGTGAAGA CTCAGATACC
CTTTATTACA TCGTAAAAGG TTCTGTAGCG GTATTGATTA AAGATGAAGA AGGTAAGGAG
ATGATCCTTT CTTATCTTAA TCAAGGCGAC TTTATCGGTG AGTTAGGATT GTTCGAAGAA
CAAGCTGAAC GTACTGCTTG GGTTCGTGCG AAACAAGCAT GTGAAATTGC TGAAATCTCT
TACAAGAAGT TCAAGCAATT AATTCAAGTT AACCCCGAAA TTCTGATGAA GCTATCGGCT
CAAATGGCAT ACCGCCTACA AAGCACTAGC CAGAAAGTGG GTAATTTAGC GTTCCTCGAT
GTGGCTGGCC GTATTGCCCA GACATTGTTG CACTTAGCTA AACAACCCGA TGCCATGACT
CACCCAGACG GCATGCAAAT TAAGATCACT CGCCAAGAAA TTGGTCAGAT CGTCGGTTGC
TCCCGCGAAA CTGTCGGTCG TATCTTAAAG ATGCTTGAAG AGCAAAATTT GATCCAAGCA
CACGGTAAAA CCATCGTGGT ATATGGTACC CGTTAA
 
Protein sequence
MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE 
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFKQLIQV NPEILMKLSA
QMAYRLQSTS QKVGNLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQNLIQA HGKTIVVYGT R