| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0615 |
|---|
| Symbol | |
|---|
| ID | 4476825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 721146 |
|---|
| End bp | 721820 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639725151 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_868260 |
|---|
| Protein GI | 117919068 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0124209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.327567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TACTCGTTGA AGATAATCCG ATGTTGGTCT CCGAACTGGA GAAACAACTC
AAACAGGCTG GCTACGTTAC CGATATTACT GACAAAGCAC TTGAAGCCGA TTACCTCGTT
AAAGAAACCC AATATGACTG CGTGATCTTA GATATTGGCC TCCCCGACGG CAATGGACTG
GAATTACTCG AAGGTTGGCG TAATCAAGGC ATTAGCACAC CGGTTATTAT GCTGACGGCT
CGCAGCCAAT GGCATGAAAA GGTCGAAGGC TTTAATGCCG GCGCCGATGA TTATTTGGGT
AAACCCTTCC ATGCACAGGA ATTACTCGCG CGTATCCAGG CGCTTATTCA CCGCGCGCAC
GGCCGATTAA ATAATCCGAG TAAACAGTTG AGCTATGGCG GTGTCACCTT AGACGAGGCC
GAGCAGACAG TAAGCGTTGG TGAGCATTTA TATGAGTTGA CCGCCATGGA GTTCAGGCTG
TTAAAAATCT TCCTCATGTC GCCTAAGAAG CTGTTATCTA AGGCACAACT GACGGACAAG
CTCTATCAGT TTGACGATGA GAAAGAGAGT AACGTGGTTG AAGTTTACGT GACTCACCTG
CGTAAAAAAC TCGGCAAAAC CGCGATTGAA ACCCGCCGCG GCCAAGGTTA TATCTTCCAC
GGCCTGACTG CATGA
|
|---|
| Protein sequence | MKLLLVEDNP MLVSELEKQL KQAGYVTDIT DKALEADYLV KETQYDCVIL DIGLPDGNGL
ELLEGWRNQG ISTPVIMLTA RSQWHEKVEG FNAGADDYLG KPFHAQELLA RIQALIHRAH
GRLNNPSKQL SYGGVTLDEA EQTVSVGEHL YELTAMEFRL LKIFLMSPKK LLSKAQLTDK
LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GLTA
|
|---|
| |