Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0614 |
Symbol | |
ID | 4476824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 719821 |
End bp | 721149 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725150 |
Product | ATPase domain-containing protein |
Protein accession | YP_868259 |
Protein GI | 117919067 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.617782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.375325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCCA TTCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTATTAGT GTTAGGCACA GTGATTGGAC TCATATTGTT TGAGTCCATG CTGCGCCAAG CGTTTCACGA CTCCATTATC AACCGCTTAG AAGAAGATCT TGAGCACATC ATGTTGGCGA CCCATATCAA CAATGGGGAG ATCCATATCG ATCAGAGCCA ACTGTCGAGC TTCTATCGCC CGGCCTATTC GGGGCGTTAT TTCCAGCTCA ACCTGCCTAA TGAAGTGATC CGCTCCCGCT CCCTGTGGGA CATGCAGCTC GATATCGAAC CTTTAGCGCC AAACCAGACC CGCGTCTGGC AGGCAAAAGG GCCGAAAAAC AATGATATGC AGCTATTATC CCTAGGGCTA AACTCCAGCA GCGCCAATGT CACCGCAACC CTAACGGTAG CGCAGGATTT GAGTATCGGC CGACGCGTGT TTAGTGAGGT CTATGGCACT AAGCTTGGGA TTAACCTCGC CATGTTGGTG GCTATGATCG CGGGGATATT CTTGATCCTG CGTCAATCCT TTAAACCGGT AAAACAGATC CAACATGCAC TCTCCCGTCT ACAGGAGGGC GAGATTAACG CCTTAGAGCT GAATAACATT CCGCCCGAAG TGCAACCGCT GGCTAAGACC TACAATGAGT TATTGGAATA CACCGCCAAG CAAATTGAGC GCAGTCGCAA TAACTTAGGC AACTTAAGCC ATGGGCTAAA AACCCCATTG GCGGTGATGC AGCAACAGGT TGAAGCCTTG GGGCTGAAAG ATCCCGATAC CGCCATGGCG CTGCAACAAC AGCTCGACGC TATCCATAAA ATGGTCGAGC GTAAACTTGC GGCGGCGCGG ATCACCGGCG ATATGTTACC TGCCGCCCAG TTAGTGGTAC CGAGGGATCT TCACAGCCTC GCCAATACCC TCAACAAAGT GCATAGAAGC AAAAGCATCG ACTGCGACTT TGAGCTTGAC CCTAGTATCC AGCGCCTGCC CATCCATAGG GAAGATGGTA TGGAGCTCTT AGGGAATCTG CTCGATAACG CCTTTAAATG GGCGGGCAGC CAAGTCACGG TAAAACTGTG GAAGGAACAA AACAAGCTCT GCCTCAGTAT AGATGATGAT GGTCCAGGGG TTGCCGATGA CGAACTCGAT AAACTCACCC AAAGAGGCAC GCGCCTCGAT GAATCAGTTA TGGGCCATGG CCTAGGGTTA TCGATAGTGA AAGAAATTGC CGAGCAATAT GGCATTGAGC TTAAGTTTAA GCACAGCAGC CACTTATCAG GCCTCAGTAT TGAACTGGTC TTTAGCTAA
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Protein sequence | MISIRTKLSL WLTGLLVLGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHINNGE IHIDQSQLSS FYRPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPNQT RVWQAKGPKN NDMQLLSLGL NSSSANVTAT LTVAQDLSIG RRVFSEVYGT KLGINLAMLV AMIAGIFLIL RQSFKPVKQI QHALSRLQEG EINALELNNI PPEVQPLAKT YNELLEYTAK QIERSRNNLG NLSHGLKTPL AVMQQQVEAL GLKDPDTAMA LQQQLDAIHK MVERKLAAAR ITGDMLPAAQ LVVPRDLHSL ANTLNKVHRS KSIDCDFELD PSIQRLPIHR EDGMELLGNL LDNAFKWAGS QVTVKLWKEQ NKLCLSIDDD GPGVADDELD KLTQRGTRLD ESVMGHGLGL SIVKEIAEQY GIELKFKHSS HLSGLSIELV FS
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