Gene Shewana3_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0614 
Symbol 
ID4476824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp719821 
End bp721149 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content50% 
IMG OID639725150 
ProductATPase domain-containing protein 
Protein accessionYP_868259 
Protein GI117919067 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.617782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.375325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCA TTCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTATTAGT GTTAGGCACA 
GTGATTGGAC TCATATTGTT TGAGTCCATG CTGCGCCAAG CGTTTCACGA CTCCATTATC
AACCGCTTAG AAGAAGATCT TGAGCACATC ATGTTGGCGA CCCATATCAA CAATGGGGAG
ATCCATATCG ATCAGAGCCA ACTGTCGAGC TTCTATCGCC CGGCCTATTC GGGGCGTTAT
TTCCAGCTCA ACCTGCCTAA TGAAGTGATC CGCTCCCGCT CCCTGTGGGA CATGCAGCTC
GATATCGAAC CTTTAGCGCC AAACCAGACC CGCGTCTGGC AGGCAAAAGG GCCGAAAAAC
AATGATATGC AGCTATTATC CCTAGGGCTA AACTCCAGCA GCGCCAATGT CACCGCAACC
CTAACGGTAG CGCAGGATTT GAGTATCGGC CGACGCGTGT TTAGTGAGGT CTATGGCACT
AAGCTTGGGA TTAACCTCGC CATGTTGGTG GCTATGATCG CGGGGATATT CTTGATCCTG
CGTCAATCCT TTAAACCGGT AAAACAGATC CAACATGCAC TCTCCCGTCT ACAGGAGGGC
GAGATTAACG CCTTAGAGCT GAATAACATT CCGCCCGAAG TGCAACCGCT GGCTAAGACC
TACAATGAGT TATTGGAATA CACCGCCAAG CAAATTGAGC GCAGTCGCAA TAACTTAGGC
AACTTAAGCC ATGGGCTAAA AACCCCATTG GCGGTGATGC AGCAACAGGT TGAAGCCTTG
GGGCTGAAAG ATCCCGATAC CGCCATGGCG CTGCAACAAC AGCTCGACGC TATCCATAAA
ATGGTCGAGC GTAAACTTGC GGCGGCGCGG ATCACCGGCG ATATGTTACC TGCCGCCCAG
TTAGTGGTAC CGAGGGATCT TCACAGCCTC GCCAATACCC TCAACAAAGT GCATAGAAGC
AAAAGCATCG ACTGCGACTT TGAGCTTGAC CCTAGTATCC AGCGCCTGCC CATCCATAGG
GAAGATGGTA TGGAGCTCTT AGGGAATCTG CTCGATAACG CCTTTAAATG GGCGGGCAGC
CAAGTCACGG TAAAACTGTG GAAGGAACAA AACAAGCTCT GCCTCAGTAT AGATGATGAT
GGTCCAGGGG TTGCCGATGA CGAACTCGAT AAACTCACCC AAAGAGGCAC GCGCCTCGAT
GAATCAGTTA TGGGCCATGG CCTAGGGTTA TCGATAGTGA AAGAAATTGC CGAGCAATAT
GGCATTGAGC TTAAGTTTAA GCACAGCAGC CACTTATCAG GCCTCAGTAT TGAACTGGTC
TTTAGCTAA
 
Protein sequence
MISIRTKLSL WLTGLLVLGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHINNGE 
IHIDQSQLSS FYRPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPNQT RVWQAKGPKN
NDMQLLSLGL NSSSANVTAT LTVAQDLSIG RRVFSEVYGT KLGINLAMLV AMIAGIFLIL
RQSFKPVKQI QHALSRLQEG EINALELNNI PPEVQPLAKT YNELLEYTAK QIERSRNNLG
NLSHGLKTPL AVMQQQVEAL GLKDPDTAMA LQQQLDAIHK MVERKLAAAR ITGDMLPAAQ
LVVPRDLHSL ANTLNKVHRS KSIDCDFELD PSIQRLPIHR EDGMELLGNL LDNAFKWAGS
QVTVKLWKEQ NKLCLSIDDD GPGVADDELD KLTQRGTRLD ESVMGHGLGL SIVKEIAEQY
GIELKFKHSS HLSGLSIELV FS