| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0612 |
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| Symbol | astD |
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| ID | 4476822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 717250 |
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| End bp | 718713 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639725148 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_868257 |
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| Protein GI | 117919065 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.17767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATT TTATTAAAGG CCAGTGGCAA GCTGGCAAGG GTCATGATGT GACCTCTAGC
AACCCAGCAA ATAGCGAAAT CATTTGGCGC GGCCAAACGG CGACGGCTGA GCAAGTCAAC
GCCGCCGTCG ATGCCGCCCG TGAAGCTCAG TTCGATTGGT TTATGTTAGG TTTTGATGGG
CGTTTAAAGA TAGTCGAAGC CTATCGCAGC CAACTCGAAG CGAACAAAGC TGAATTAGCC
GAAACGATCG CTCAGGAAAC CGGTAAACCT CAATGGGAAA CGGCGACAGA AGTCGCTGCC
ATGATTGGTA AGATTGGCCT GTCGGCAACG GCTTATAACA AGCGTACTGG CACAGAGGCC
AATGATACGC CAGCAGGGCG CGCGGTACTG CGCCATAAGC CTCACGGTGT GGTTGCTGTG
TTTGGGCCTT ACAATTTCCC AGGGCATTTA CCCAATGGTC ATATAGTGCC AGCGCTGCTC
GCGGGCAATA CCGTGGTGTT TAAGCCCTCT GAATTGACGC CTAAAGTGGC CGAGTTGATG
GTCTCTCTGT GGGAAAAGGC GGGTCTGCCT GCGGGTGTTA TCAACTTAGT GCAAGGTGAA
GTCGACACGG GTAAGGCGCT GGCGTCGCAC CCACAACTCG ACGGCCTGTT CTTTACCGGT
AGTTCTCGCA CTGGTCATCT GTTGCACCAG CAATATGCGG GTCATCCGGG TAAGATCCTC
GCCTTAGAAA TGGGCGGTAA TAACCCGCTG ATTATTAAAG GCGTCGCCGA TATTAAAGCG
GCTGTGCACG ATATTCTGCA ATCGGCCTAT ATTTCATCTG GCCAGCGTTG TACCTGTGCA
CGTAGGCTCT ATGTTGAGCA AGGTGAGCAG GGCGATGCCT TAGTCGCCAA GCTAGTTGAA
GCGGTGAAGC AGATTAAAGT CGGTCCTTGG AACGCGCAGC CACAGCCATT TATGGGTTCA
ATGATTTCCG AAGCCGCGGC GAAAGGCATG GTCGCAGCGC AGGCTAACCT GCAGAACTTA
GGCGGCGTGT CACTGGTTGA ACTCTCCCAC CTGCAAGCGG GAACGGGCTT AGTCTCACCC
GGACTTATCG ATGTGACTGC GGTGGGCGAG TTACCCGATG AGGAATACTT CGGACCACTG
CTGCAATTAG TACGCTACAG CGATTTTGAC CAAGCGATTA AGCTGGCTAA CCAAACCCGT
TATGGTTTAT CCGCGGGTAT CTTGGCCGAT AGCCGTGATG ATTATGAGTA TTTCCTCGCC
CGCATTCGTG CTGGTATTGT GAATTGGAAC AAGCAGATCA CCGGAGCTTC TGGCGCAGCG
CCTTTTGGCG GCGTAGGGGC TTCGGGTAAT CACAGGGCAA GTGCATTTTA TGCCGCCGAC
TACTGTGCTT ATCCCGTTGC CTCCGTTGAG GCGGATGCGG TGAGTTTACC CGCAAGCCTA
AGCCCAGGGT TAAGTTTAGA GTGA
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| Protein sequence | MTHFIKGQWQ AGKGHDVTSS NPANSEIIWR GQTATAEQVN AAVDAAREAQ FDWFMLGFDG
RLKIVEAYRS QLEANKAELA ETIAQETGKP QWETATEVAA MIGKIGLSAT AYNKRTGTEA
NDTPAGRAVL RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVVFKPS ELTPKVAELM
VSLWEKAGLP AGVINLVQGE VDTGKALASH PQLDGLFFTG SSRTGHLLHQ QYAGHPGKIL
ALEMGGNNPL IIKGVADIKA AVHDILQSAY ISSGQRCTCA RRLYVEQGEQ GDALVAKLVE
AVKQIKVGPW NAQPQPFMGS MISEAAAKGM VAAQANLQNL GGVSLVELSH LQAGTGLVSP
GLIDVTAVGE LPDEEYFGPL LQLVRYSDFD QAIKLANQTR YGLSAGILAD SRDDYEYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASVE ADAVSLPASL
SPGLSLE
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