| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0610 |
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| Symbol | argD |
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| ID | 4476820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 714876 |
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| End bp | 716093 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725146 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_868255 |
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| Protein GI | 117919063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0636462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTTG ATATGAAGTT GAATCGTGCC CAGTTTGATG CGGTTATGGT GCCTAACTAT
GCGCCTGCTG CCGTAATCCC TGTACGTGGC GAAGGAAGTC GAGTATGGGA TCAAGAGGGT
AACGAATTTA TCGATTTTGC CGGCGGTATC GCGGTAAATT GCTTAGGTCA CTGTCATCCC
GCCTTAGTAA ATGCCTTAAA AACGCAAGGC GAAAAATTAT GGCACCTGTC TAACGTGATG
ACCAACGAGC CAGCGCTTGA GCTTGCAACT AAGTTGGTTA ACAGCACGTT TGCTGAGCGT
GTGTATTTTG CTAACTCTGG TGCCGAAGCC AACGAAGCGG CACTGAAATT AGCTCGTCGT
TACGCCTTAG AAAAATTCGG CGTAGAGAAA GATGAAATCA TCGCCTTCGA TAAAGCCTTC
CACGGTCGTA CTTTCTTCAC CGTGAGCGTT GGCGGTCAAG CGGCTTATTC AGATGGTTTT
GGTCCAAAAC CACAAAGCAT CACCCACTTA CCTTATAACG ATGTTGCGGC ATTAGAAGCG
GCCGTGTCGG ATAAAACCTG CGCCATTATG CTTGAGCCAC TGCAGGGTGA GGGCGGTATT
ATCGATGCCG ATCCTGCATT CTTAAAAGCG GTTCGCGAAC TGGCCAACAA GCACAACGCA
CTAGTGATTT TCGACGAAGT ACAAACTGGT GTTGGCCGTA CTGGTGAACT CTACGCTTAC
ATGGGTACCG ACATAGTGCC GGATATCCTG ACCACGGCTA AAGCGCTGGG CGGCGGTTTC
CCGATCGCAG CTATGCTGAC GACCGCTGAA ATTGCTGAGC ACCTGAAAGT GGGTACTCAC
GGTTCAACCT ACGGTGGTAA CCCATTAGCT TGTGCTATCG GTAACGCGGT ATTAGACGTG
GTTAACACAC CAGAAGTCTT GAACGGTGTG AAACATCGCG AGCAGTTATT ACGCGATGGT
CTGAACAAAA TTAATGAAAA ATATCATGTT TTCTCTGAAA TTCGCGGTAA AGGCTTGCTG
TTAGGGGCGG TTCTAAACGA ACAGTACCAA GGTCGTTCAC GTGACTTTTT AGTAGCGTCT
GTTGCAGAAG GCTTAATGAG CCTGATGGCG GGTGCTAACG TGGTACGTTT TGCTCCTTCA
CTGGTGATCC CTGAGGCAGA TATTGCAGAA GGCCTAGCAC GTTTTGAGCG TGCTGTGGCG
AGCATCGCTG CTGCCTAA
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| Protein sequence | MSVDMKLNRA QFDAVMVPNY APAAVIPVRG EGSRVWDQEG NEFIDFAGGI AVNCLGHCHP
ALVNALKTQG EKLWHLSNVM TNEPALELAT KLVNSTFAER VYFANSGAEA NEAALKLARR
YALEKFGVEK DEIIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPQSITHL PYNDVAALEA
AVSDKTCAIM LEPLQGEGGI IDADPAFLKA VRELANKHNA LVIFDEVQTG VGRTGELYAY
MGTDIVPDIL TTAKALGGGF PIAAMLTTAE IAEHLKVGTH GSTYGGNPLA CAIGNAVLDV
VNTPEVLNGV KHREQLLRDG LNKINEKYHV FSEIRGKGLL LGAVLNEQYQ GRSRDFLVAS
VAEGLMSLMA GANVVRFAPS LVIPEADIAE GLARFERAVA SIAAA
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