| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0609 |
|---|
| Symbol | |
|---|
| ID | 4476819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 713656 |
|---|
| End bp | 714567 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639725145 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_868254 |
|---|
| Protein GI | 117919062 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0167175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGCT GGCAAGCATC TGTATTAAAT ACTATTTTAT CTTATGTGGC ACGGCCATCC
ATCAGCCGTG GCAAGGCTAA ACTCCCCCTT AATCAAGTAC GGCAACGCTT ATTAGAGCTG
GATAAGCGCT GGCTGCCGTG GCCCGAAAAA CTCGTTACGG CCTCGATTCC CTTGCAACAT
TCTACCCTGT TGCATTATGT GCTGCTGAAT GACACACCGC GTTTGGGCAA TCTGTTTTAC
ATTCGAGGCG GCGGATTTTG TTTTAAAACT CCCCATGCCC ACGCAAGACT GGTGGCCGAT
ATCAGTGAGC GTTGTCGCCT CGATACGTTT ATCCCAGATT ATCGTTTAGC GCCGGAGCAT
CCGTATCCCG CGCCCTGTGA CGATGTGCTC GAGGCTTACC TGCACTTAAT TGAGTTGAAA
GGCAGCGATA ATCTGGTGTT GATGGGCGAT TCCGCCGGCG GCAATTTAGC CTTGAGTCTG
CTGCTCGAAC TGAAAAAGCG CCATCTGCCC ATGCCTAAAG CCTGTGTGTT GTTGTCACCC
GCGCTTGATT TAGCCATTAC CGGCGATACC GAGCTGATTT TAGGGGCGGA CGATCCGTTC
TTTACCATTG AGTCGCTTTT GCGGCTGCGC GGCGCTTATC TTGCTGGGGC GGATCCTATG
TCTGAACGGG TTTCGCCTTT GCAGGGGAAC TTGGCTGACT TGCCGCCACT CTTAGTGATT
GCCGGTACGC GCGAGTTGCT TTTACAGGAC TCAGAACGAC TGGTTATGCA AATTAAGGCC
TGTGGTGGTG TGGTAGAATC GCGTTTTTAT CACAACATGC CCCATGTTTT TCCCCTGTTC
CATCTGTTGC CAGAAGCGAT TGAGGCGAGG GAACAAATTG CAGATTTTGT GCTTTCACAG
CTGATTCGTT AA
|
|---|
| Protein sequence | MPSWQASVLN TILSYVARPS ISRGKAKLPL NQVRQRLLEL DKRWLPWPEK LVTASIPLQH
STLLHYVLLN DTPRLGNLFY IRGGGFCFKT PHAHARLVAD ISERCRLDTF IPDYRLAPEH
PYPAPCDDVL EAYLHLIELK GSDNLVLMGD SAGGNLALSL LLELKKRHLP MPKACVLLSP
ALDLAITGDT ELILGADDPF FTIESLLRLR GAYLAGADPM SERVSPLQGN LADLPPLLVI
AGTRELLLQD SERLVMQIKA CGGVVESRFY HNMPHVFPLF HLLPEAIEAR EQIADFVLSQ
LIR
|
|---|
| |