Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0600 |
Symbol | |
ID | 4476635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 703661 |
End bp | 704554 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639725136 |
Product | HflC protein |
Protein accession | YP_868245 |
Protein GI | 117919053 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00172359 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000122116 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTAGAT TAAGTATTGT TCTGATTGCC ATCGTATTAG GCATAGGTCT GTCATCTGTG ATGGTGGTTA ACGAAGGCGA ACGTGCGATT GTGGCGCGTT TCGGTGAAAT CGTTAAAGAC AAGGTTGACG GCAAACCAGT GACCCGCGTT TTCGCCCCTG GCATACACTT TAAAGTGCCG GTGATCGATA AAGTGAAGTT ACTCGATGCG CGTATCCAAA CCTTAGATGG TGCAGCGGAT CGTTTCGTCA CCTCTGAGAA GAAAGATTTG ATGGTCGACT CCTATGTGAA GTGGCGTATT TTCGACTTCG AAAAATACTA CCTCTCCACT AACGGTGGTA TTAAGTCGAA TGCCGAGACC TTACTACAAC GTAAGATCAA CAACGACTTA CGTACCGAGT TTGGTCGCCG CACTATCAAA GAAATCGTTT CTGGTAAACG CGATGAGCTG CAAAATGATG CGTTAGAAAA CGCCTCTGAA AGCGCTAAAG ACTTAGGTAT TGAAGTGGTT GATGTGCGTG TGAAGCAAAT CAACCTACCT GCAAACGTGA GTAACAGTAT TTACCAACGT ATGCGTGCCG AGCGTCAAGC GGTTGCTAAA GAGCATAGAG CACAGGGTAA AGAGCAGTCT GAAATTATCC GTGCGACCAT TGATGCCAAC GTGACCGTGA AGATTGCCGA AGCCGAGCGT AAAGCCTTAA CCATCCGCGG TGAAGGTGAT GCGCAAGCCG CGAAAATTTA TTCTGATGCT TACAGTAAAG ATCCCGAGTT TTTCAGCTTC TTACGTAGCT TAGATGCTTA CCGTGCGAGT TTCTCCGGTA ACTCTGACGT CATGGTATTA GAACCTGATA GCGAGTTCTT CAAATATATG AAGAGCACTT CACCTAAGAA GTAA
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Protein sequence | MGRLSIVLIA IVLGIGLSSV MVVNEGERAI VARFGEIVKD KVDGKPVTRV FAPGIHFKVP VIDKVKLLDA RIQTLDGAAD RFVTSEKKDL MVDSYVKWRI FDFEKYYLST NGGIKSNAET LLQRKINNDL RTEFGRRTIK EIVSGKRDEL QNDALENASE SAKDLGIEVV DVRVKQINLP ANVSNSIYQR MRAERQAVAK EHRAQGKEQS EIIRATIDAN VTVKIAEAER KALTIRGEGD AQAAKIYSDA YSKDPEFFSF LRSLDAYRAS FSGNSDVMVL EPDSEFFKYM KSTSPKK
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