Gene Shewana3_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0594 
Symbol 
ID4476629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp696509 
End bp697900 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content48% 
IMG OID639725130 
Productcell wall hydrolase/autolysin 
Protein accessionYP_868239 
Protein GI117919047 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000169523 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000280884 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTAAAA ATAAGCATTA CTTTCAGACT ATTACTCTTT TTCTGTGCGC TTTTTTTGCT 
GTAGCAGCTC ATGCTGCTAA CCAGCTTGAG GGCGTGCGTA TTTGGGCTGC CCCCGAGTCG
ACCCGTGTGG TGTTCGATTT GAGTGAAGCG CCAAACTACA CTTATTTTTC CCTCGATGGG
CCCAATCGTT TAGTGGTCGA CCTTAAAAAG GCGTCGACAA AACTGAGCCT GAAAAATATC
GATAACAACA GTAAATTGGT TAAAGGGGTT CGCGTCAGCA AATCACCCAC TAAAGGTGAT
TTACGTTTGG TGATCGATCT TGTTAAGCCA TTAAATGCTA ACTTGTTTTC CCTTCCCGAG
ACGGCGCCCT ATGGTAATCG TTTGGTGGTG GATCTTGAGG ATAAAACCTT AACGACGGCA
ACAGCTGTGG TGAGTTCGAC TCCCGTTAAA ACGGTTACTC AATCGGCGCA ATCCTCCCGT
GATATTGTGG TAGCGATTGA TGCGGGCCAT GGTGGTGACG ATCCTGGTTC TATTGGCCCT
TCAGGTGTTT ACGAGAAAAA AGTGGCACTG GAGATAGCAA AAAGAGTGGC CAGTAAGATC
AACGACACGC CGGGTATGCG GGCAGTGATG ATCCGTACCG GCGATTACTT TGTGAATTTG
AACAAGCGCT CCGAGCTCGC CCGTAACAGT AAGGCCGATT TACTGATTTC TATCCACGCC
GATGCTTTTA CCTCGCCTCA GCCAAAAGGA GCGTCTGTGT GGGTATTGTC GATGCGCCGC
GCGAACAGTG AAATTGGTCG TTGGTTAGAG CAAAAAGAGA AACACTCAGA ACTCTTAGGT
GGTGCAGGGG AAATTATTCA AAATACCGAT AATGAACAGT ATCTTGCAAT GACTCTGCTC
GACATGTCCA TGAACAGTTC GATGGCTATT GGTCACTCAG TTGCTGGGGA TATTCTCAAG
GATCTCGGTT CAGTGACTGA GCTGCATAAG AGTCGCCCTG AGTCTGCGAG CCTTGCGGTA
TTAAAATCCC CCGATATTCC CTCTATTCTG GTGGAGACAG GATTTATTTC GAATCCGAAG
GAAGAAAGGT TACTTAATAG CAGTCGCCAT CAGGAAAGTA TCGCAACCGC TATCTATAAG
GGCGTTAGCC GTTATTTCCA CAATAACCCG CCGGCAGATA CCTTGCTCGC GAAGCGTAAT
AGCGGCGGCA CAACGGCCAG CTCGAGCGCG AAATCCTCCT CGGGAAATAT CAAGCACAAG
GTGAGCCGCG GCGAGTCACT TTCGGCGATT GCTCAGCGTT ATCAAGTGCC TATGGCTAGC
ATTAAGCGCG CCAATGGCAT GAAGACGGAT GTGGTACAAC TCGGGCAAAC ACTCGTTATT
CCTGAGAGTT AA
 
Protein sequence
MTKNKHYFQT ITLFLCAFFA VAAHAANQLE GVRIWAAPES TRVVFDLSEA PNYTYFSLDG 
PNRLVVDLKK ASTKLSLKNI DNNSKLVKGV RVSKSPTKGD LRLVIDLVKP LNANLFSLPE
TAPYGNRLVV DLEDKTLTTA TAVVSSTPVK TVTQSAQSSR DIVVAIDAGH GGDDPGSIGP
SGVYEKKVAL EIAKRVASKI NDTPGMRAVM IRTGDYFVNL NKRSELARNS KADLLISIHA
DAFTSPQPKG ASVWVLSMRR ANSEIGRWLE QKEKHSELLG GAGEIIQNTD NEQYLAMTLL
DMSMNSSMAI GHSVAGDILK DLGSVTELHK SRPESASLAV LKSPDIPSIL VETGFISNPK
EERLLNSSRH QESIATAIYK GVSRYFHNNP PADTLLAKRN SGGTTASSSA KSSSGNIKHK
VSRGESLSAI AQRYQVPMAS IKRANGMKTD VVQLGQTLVI PES