Gene Shewana3_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0592 
Symbol 
ID4476627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp694463 
End bp695962 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content53% 
IMG OID639725128 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_868237 
Protein GI117919045 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000415893 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACAAG ATTTATCGAG TTTACCCACA GCGCTTTATA CGCAGCAGCA GGTGAGAGCC 
GCCGAACTGC TCGCTGTTTC AGAAGGGGAA ACCACTTTAT ATCAATTAGT TGAACGTGCT
GGGCGGGCGG CATTTGAGTG TTTTACTCAA CAGCGTGAAC GGCATCCTCA GCTTGAAGGA
ATGCCTTTAC TGGTATTAGC GGGTAGCGGC AATAATGGCG CCGATGCGCT TGTTTGCGCG
CGCCTAGCCT TAGAAGCAGG ACATCAGGTC AAGGTTTATT TGCTCAAGAC ACAAGGCACT
GCAGAGTTCG AGCATGCACT TTCTGCCTAT CTTAACCAGG GCGGTGTTAT CGATTCCCCC
AATATCGAAG CGATACAGCA GGCGCCAGTC ATTATCGATG GGCTACTGGG CACGGGAGTG
AAGGGCGCCG TGCGTGAGGA TATTGCTGCA CTGATCCATG CCGTCAATCA GAGTGAGGCT
TGGGTGCTGA GTTTAGATCT GCCTTCGGGG ATCGTTGCCG ATACTGGCGT TGCCCTTTAC
GTCGCCGTGA TGGCGGATGT CACTCTGTGC TTTGGAGGGT TAAAGCAGGG GCTTTTGACC
AGTAAGGCGA GACACCACTG TGGCCATTTG ACCTTTGCCG ATCTGGGATT AACGCCTTTT
TTCGATGCTG AGAATGCAAC GCGAGTCGGC GGTGAAATGT TAAAAAGCCA TTTTGCCGCA
AGAGCACGGG ACAGCCACAA GGGGCAATCG GGTAAGGTAA CGCTGATCGG TGGTGACTTT
GGTATGGCGG GAGCCATTCG CCTCGCTAGT GAAGCCTGTT TACGTGCGGG CGCCGGATTG
GTGACTGTGA TCAGTAGGCC TGAACATCAA TTAACAGTGA ATGTCTCGCG CCCCGAATTG
ATGTTTTGGG GCTGTGAACT GGTTGATATG GAAGTCTATC TGCGCCTAGG TTGGGCACAG
GTGGTGGTAC TTGGCCCCGG TTTAGGAAAA CACGATTGGG GTTATAACTT GTTTAAAGCC
GCGGGCTTAA GCGATAAACC CTGTGTGCTC GATGCCGATG CTCTAAATCT ATTGAGTCAA
GAACCGCGCA GGCAAACTAA CTGGGTACTC ACGCCCCATC CTGGGGAAGC TGCACGGCTC
TTAGGATGCA GTGTCGCCGA TATTGAGCAG GATAGATTCG CTGCCGTGCG TGCCCTGCAG
CAAAAATATG GTGGCGTGGT GCTGCTAAAA GGTGCGGGTA CTGTCATTTT TGATGGAAAA
CAGATGGTCG TGGCACCTGT TGGAAATCCG GGGCTTGCGA GTGGTGGGTG CGGCGATGTG
TTATCTGGTA TTATAGGCGC ACTTATGGCT CAAGGAATGG ATAACATGCA GGCGACCGTT
GTTGGGGTTG TCGTTCATGG CTGCGCGGCG GATCTGGCTG CAGTGCAGGG TGAGCGGGGC
ATGTTAGCCA GCGATTTGAT GCCTTTTATT CGCCAATTAG TAAATAGTGA TTTACTCTAG
 
Protein sequence
MAQDLSSLPT ALYTQQQVRA AELLAVSEGE TTLYQLVERA GRAAFECFTQ QRERHPQLEG 
MPLLVLAGSG NNGADALVCA RLALEAGHQV KVYLLKTQGT AEFEHALSAY LNQGGVIDSP
NIEAIQQAPV IIDGLLGTGV KGAVREDIAA LIHAVNQSEA WVLSLDLPSG IVADTGVALY
VAVMADVTLC FGGLKQGLLT SKARHHCGHL TFADLGLTPF FDAENATRVG GEMLKSHFAA
RARDSHKGQS GKVTLIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL
MFWGCELVDM EVYLRLGWAQ VVVLGPGLGK HDWGYNLFKA AGLSDKPCVL DADALNLLSQ
EPRRQTNWVL TPHPGEAARL LGCSVADIEQ DRFAAVRALQ QKYGGVVLLK GAGTVIFDGK
QMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATV VGVVVHGCAA DLAAVQGERG
MLASDLMPFI RQLVNSDLL