| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0583 |
|---|
| Symbol | |
|---|
| ID | 4476544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 683607 |
|---|
| End bp | 684539 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639725115 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_868228 |
|---|
| Protein GI | 117919036 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCACA AGTTACTCTT ACTGACCAAG GCGAATGAGC AGTATCGCCA GCTCATTGAG
GCGCAGCAGT TGCCAGGGCT TGAGTTGCTC GATGATAATC CCGCGAATAT TGCAGAGGCT
AACATTTGGC TTGCCGAACC TAAGCTTGCC GCACCACTGG TGCCCCATGC CAAACAGCTA
AAATGGCTGC AATCCAGTTT TGCAGGCATT GATGCCCTGA TGGGCCCAAG AGCGAGAAAA
GATTATCAAC TCACTAACAT TAAAGGTATT TTCGGCCCCT TGATGAGTGA GTATCTATTT
GGTTATCTGC TCGCCCATGT GCGAGGACAT CAGTTTTATC AAGCGCAGCA AAGGCAAAAA
TCTTGGCAAG TGCAAAGTGC TACGCGCGGC AGCTTGCAAG GGATGCGATT ATTACTCTTA
GGCACAGGCT CTATCGCCCA GCACGTGGCC AAGACAGCTA AGCACTTCGG CATGCATATT
ACTGGAATAA ACCGCAGCGG CCGTGAGGTC GACGGCTTTG ATTTGATCCA GCCGCTCTCG
CAGCTCGGGC AATGCTTAAG CCAAAGCGAT GTGGTAACCA ATTTACTGCC AAGCACCCCT
GAGACACGTT TGCTGCTAAA TGCAGACATG CTCGCCACGC TCAAAGCCGA TGCCATTTTA
GTGAATGTGG GCCGTGGTGA TGTGCTCGAC CTCGATGCCC TCAATACCCA GTTGATTGCG
CGTCCTGAAC AACATGCCGT TCTCGATGTG TTCACGCAGG AGCCACTCCC TGCGAGTCAT
CCGATTTGGG AAAGACCCAA CGCCATCATC ACGCCCCATA TCTCCGCGCC GAGTCATCCA
GAACAAATCG TGCGTATTTT TAGCGACAAC TATCGCCGCT ATATTGCAGC CGAGCCGCTG
CAAAATCAGG TCGATTTTAT TCAGGGCTAC TAG
|
|---|
| Protein sequence | MGHKLLLLTK ANEQYRQLIE AQQLPGLELL DDNPANIAEA NIWLAEPKLA APLVPHAKQL
KWLQSSFAGI DALMGPRARK DYQLTNIKGI FGPLMSEYLF GYLLAHVRGH QFYQAQQRQK
SWQVQSATRG SLQGMRLLLL GTGSIAQHVA KTAKHFGMHI TGINRSGREV DGFDLIQPLS
QLGQCLSQSD VVTNLLPSTP ETRLLLNADM LATLKADAIL VNVGRGDVLD LDALNTQLIA
RPEQHAVLDV FTQEPLPASH PIWERPNAII TPHISAPSHP EQIVRIFSDN YRRYIAAEPL
QNQVDFIQGY
|
|---|
| |