| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0574 |
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| Symbol | |
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| ID | 4476535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 666930 |
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| End bp | 669836 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725106 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_868219 |
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| Protein GI | 117919027 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTG CCTTAGGACA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA
ACAGTCGTAC AAGTTGAAGG CCGTATGGTC ACAGTGTTAT TCCCTGCGAC TGGTGAGAAC
CGTATGTTCT CACGCAACGA AGCCCCCCTG ACCCGTGTCA TATACAACCC TGGCGATACG
GTTGAAAGCC ACGAAGGCTG GAGCCTCTCG GTTGAAGAAC TCACCGAAAA AGACGGCCTC
GTCGTCTACC ACGGAATCCA CAGCGAAACA GGTGAGAAAG TCAGCCTGCG CGAGACCCTG
TTAAACCACA ACATTCGCTT TAACAAACCG CAGGATCGCC TGTTTGCCGG CCAGATTGAC
CGCCTCGACC GTTTCGGTAT TCGTTATCAA TGCCAGTTAC TGCGTCATCA ACTGGCGACC
TCAGATTTAC TCGGCTTACA AGGTCCACGC GTCGGCCTTA TCCCCCACCA GATGTGGATT
GCCCATGAAG TGGGTCGTCG TTATGCGCCG CGTGTATTGC TGGCGGACGA AGTAGGTTTG
GGTAAAACCA TCGAAGCGGG TCTGATTATC CATCAACAAC TGCTCACTGG CCGCGCCGAG
CGAGTGCTGA TTATTGTGCC GGATACCCTG CGCCATCAGT GGTTAGTGGA AATGCTGCGC
CGCTTTAACC TGCGCTTCTC AGTATTTGAT GAAGACCGTT GTGTCGAAGC CTTTGCCGAC
CATGACAATC CTTTCTACAC CGAGCAGTTA GTGATTTGTT CCCTCGAATT ACTGCGTAAA
AAGAAACGTC TCGACCAAGC ACTCGATGCC GACTGGGATC TGCTGGTCGT CGACGAGGCT
CACCACTTAG AGTGGACCGA AGAAGCCCCT AGCCGTGCCT ACCAAGTGGT TGAAGCATTA
AGCGAAGTAG TGCCTGGCGT ATTGTTATTA ACAGCAACGC CAGACCAACT CGGCCATGAG
AGCCACTTTG CGCGCCTGCG CCTACTCGAC CCAGATCGTT TCTACGACTA CGATGCCTTC
CTCGCCGAAG AAAACAGCTA CAAAGATGTC GCCGTTGCCG CCGAAGCCTT AGCGGGCGAC
GCAAAATTAT CCGATGCCGC CATCAACAGC CTCACCGAAT TACTCAGCGA GAAAGACATA
GCGCCGAGCA TTCGTTTAAT TCAAGCCGAA GATATCGATA GCGAACTGCA ACAAGCGGCT
CGCAGCGAAC TGCTGCAAGA GTTGCTCGAC CGCCACGGCA CAGGTCGCGT GCTGTATCGC
AACAGCCGCG CCTCGGTAAA AGGTTTCCCG AAACGTATTT TCAACGCCTA TCCCCATGCA
ATGCCTGAGC AGTATCTTAC CGCGGCCCGC GTAAATGAGA TGATGGGTGG CCGTAAGAGC
TTAGAAGCGC AAGCGGCTCA AGCCCTAAGT CCTGAAAAAC TCTACCAAGA ATTTGAAGAT
AACAGCGCCA GTTGGTGGAA GTTCGATCCT CGCGTGGATT GGTTAATCGA GTTCTTAAAG
TCGCACCGCA GCAAGAAAGT GTTGATCATC GCCAGTGGCG CCGATACCGC CCTGAGCTTA
GAAGAAGCCC TGCGTACCCG TGAAGGCATT CAAGCTACCG TATTCCACGA AGGCATGTCG
ATCATCGAGC GCGACAAGGC GGGAGCCTAC TTCGCCCAAG AAGAAGGCGG CGCCCAAGCG
CTGATCTGTT CTGAAATCGG CTCCGAAGGT CGTAACTTCC AGTTCGCCAG CCACTTAGTG
CTGTTCGATC TGCCATTGAA CCCAGATTTA TTAGAGCAAC GTATCGGCCG TTTAGACCGT
ATCGGTCAAA AGAACGATAT CCAAATTCAC CTGCCTTATC TGCAAGATAC GGCGCAGGAA
CGTCTGCTCA ACTGGTATCA CCAAGGTCTG AATGCCTTCG AGCTGACCTG TCCAAGTGGC
CATGTGCTGT ACAGTGAATT TGCCGAAGAT CTGTTGAATG TTCTCGTCGG CGGGGATGAA
GATGAGCTAA CCAATCTGCT CAACCACACC CAAAGCCGTT ACAAAGAACT GAAACACGCT
ATGGAGCAAG GCCGCGATAA GCTGCTGGAA ATCAACTCCC ACGGTGGCGA TAAGGCTAAG
GCGATTGTCG AACGTTTAGC CCAAAGCGAT CAGGACACTA AGCTGATTGG TTCGGTGATC
CGCTTGTGGG ACATTATCGG TGTCGATCAA GAAGATAAAG GTGAGAACTC TATCATCCTG
CGTCCAAGCG AACACATGAT GTTCCCAACC TATCCGGGTC TGCATGAGGA TGGCGTGACG
GTCACCTTCG ACCGTGATAC CGCACTCTCC CGTGACGATA TCGCCCTGAT CACCCAAGAG
CACCCGTTGG TGCAAACAGG CTTAGATCTG ATCACCGGCT CTGACACAGG CACGACGAGC
GTCGCGATTT TGAAAAACAA AGCCTTGCCC GCCGGCACCC TGTTCTTAGA ACTGATCTAC
ATGGCGGATG CTTCGGCGCC TAAATCGAGC CAGTTATATC GTTATCTGCC ACCAACGCCT
ATCCGCGTAC TGCTGGATAA AAACGGTAAC GATTTGTCAG CTAAGGTGGA TTACACCAGC
TTTGACAAAC AGTTAAGCGC GGTTAACCGC CATATTGGCA GCAAGTTAGT CACAGCATCC
CAACCGATTC TGCATCCGTT ATTTGCTAAG GGTGAAGAAT ATGCCCAAAC CGCGGTGAAC
GAGTTAGTGG CACAGGCGCG TGAGAAAATG ACCAGCCAAC TGACGGGCGA ATTAGACCGT
TTAGAGTCTT TGAAAGCGGT TAACCCGAAT ATCCGTGAGG AAGAGTTGGA ATACCTGCGT
AATCAAATGC AGGAACTGAG CACTTACCTC GACGCAAGTC AGCTACAGCT CGACGCGATT
CGTATGGTTT TGGTTAGCCA TGTCTAA
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| Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRNEAPL TRVIYNPGDT
VESHEGWSLS VEELTEKDGL VVYHGIHSET GEKVSLRETL LNHNIRFNKP QDRLFAGQID
RLDRFGIRYQ CQLLRHQLAT SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL
GKTIEAGLII HQQLLTGRAE RVLIIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAFAD
HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL
SEVVPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEENSYKDV AVAAEALAGD
AKLSDAAINS LTELLSEKDI APSIRLIQAE DIDSELQQAA RSELLQELLD RHGTGRVLYR
NSRASVKGFP KRIFNAYPHA MPEQYLTAAR VNEMMGGRKS LEAQAAQALS PEKLYQEFED
NSASWWKFDP RVDWLIEFLK SHRSKKVLII ASGADTALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR
IGQKNDIQIH LPYLQDTAQE RLLNWYHQGL NAFELTCPSG HVLYSEFAED LLNVLVGGDE
DELTNLLNHT QSRYKELKHA MEQGRDKLLE INSHGGDKAK AIVERLAQSD QDTKLIGSVI
RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLHEDGVT VTFDRDTALS RDDIALITQE
HPLVQTGLDL ITGSDTGTTS VAILKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP
IRVLLDKNGN DLSAKVDYTS FDKQLSAVNR HIGSKLVTAS QPILHPLFAK GEEYAQTAVN
ELVAQAREKM TSQLTGELDR LESLKAVNPN IREEELEYLR NQMQELSTYL DASQLQLDAI
RMVLVSHV
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