Gene Shewana3_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0570 
Symbol 
ID4476531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp662313 
End bp663287 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content48% 
IMG OID639725102 
Productdiguanylate cyclase 
Protein accessionYP_868215 
Protein GI117919023 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACG ATCAAAGCGC AATGAACGAA CTCCATTGGC TTATCGATAT GGTGCAAACC 
ATCGAAGTGG GTCTAGTGGT ATTAGATCGC GATTATAATA TCCAACTGTG GAACGGCTTT
ATGGAAAACC ATAGCGGCGT ATCCCCTAAT TCGATTAAAG GGCAAAACCT GTTCACCCGT
TTTCCTGAGC TACCAGCGAC TTGGTTAAAG CAAAAGATGG AATCGGTTTT TATGCTGAAA
AATCGAGCCT TTATCAGCTG GGAACAAAGA CCCTACGTGT TTCAGTTTAA AAACTACCGC
CCCATTACCG GACGGGCCGA TTTTATGTAC CAGAACGTGA CACTGTTGCC TCTGGCCTCA
TTAACCGGAA AAATAACCCA TATCAGCGTG ATTATTTATG ATGTCACCGA CATCGCCGTC
AACAAGCTAC AGCTCAAGGC CGCCAACGAG CAGTTAGAAC GCCTCAGCCA GACCGATGGC
CTGACACAGC TCCATAATCG CCGCCATTGG CAACAATGTT TAGAGCATGA GTTTGACCTC
CACGCCCGTT ATTCGGGGAT GTCGAGCTTG GTCATGATTG ACATAGACCA TTTCAAAAGA
ATCAACGATA CCTACGGCCA TGTCGCGGGT GATAAGGTGA TTCAGCATAT CGCCCATATC
CTAAGCCATT CATTAAGGGA GACCGATTGT GTCGGCCGCT ATGGTGGTGA GGAGTTCGCT
GTGGTCATGC CCAATACTTG TGGCGCCGAT GCCCTCAACT TTACCGAGCG TTTGCGGGAA
AGAATTGCCG ACTCCACCAT AGTGTACGAA GGGCTGAAGA TAAAAGTCAC AGTAAGCCTA
GGCGTGTGTG AAATCGGCAA ACATATCACC AGCAGCTCTG GCTGGATTTC TTGCTCAGAC
AAAGCCTTAT ACGAAGCCAA GCAAAAAGGA CGTAACTGTA GCGTCCTGCA CACCGCACAA
ACCAGTGGTT ACTGA
 
Protein sequence
MSNDQSAMNE LHWLIDMVQT IEVGLVVLDR DYNIQLWNGF MENHSGVSPN SIKGQNLFTR 
FPELPATWLK QKMESVFMLK NRAFISWEQR PYVFQFKNYR PITGRADFMY QNVTLLPLAS
LTGKITHISV IIYDVTDIAV NKLQLKAANE QLERLSQTDG LTQLHNRRHW QQCLEHEFDL
HARYSGMSSL VMIDIDHFKR INDTYGHVAG DKVIQHIAHI LSHSLRETDC VGRYGGEEFA
VVMPNTCGAD ALNFTERLRE RIADSTIVYE GLKIKVTVSL GVCEIGKHIT SSSGWISCSD
KALYEAKQKG RNCSVLHTAQ TSGY