Gene Shewana3_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0556 
Symbol 
ID4476517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp648950 
End bp649846 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content53% 
IMG OID639725088 
ProductGumN family protein 
Protein accessionYP_868201 
Protein GI117919009 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA GTCGATGGCG ACTATTACTG GCGCTGTGCG GCGTCGCAAT GTTTACCAGT 
GCGTCGGGTT GGGCGGCACA GACGGATAAA CCGCCGTTTT ATCAGGTGCA ATGGCAGGGG
AAATCCGCTT ACCTTTTGGG CTCGATTCAT ATCGGCCGTG CCGATTTTTA TCCTATGCCG
GCGCAAGTGG AAGCGGCATT TACCAAGTCC AAGGGATTGG TGGTTGAAAT CGATACCAAT
AAAATCGACA GCCGTGCCCT ATTGCAAAAG TATGGTATGG CGACTCACGC ACAGGGGCTA
GATTGGCAGA GCCGGGACAA ACAAACGATA GAGGTGATGC GCCACTATTG TGAAGACAAA
GCAAGCCTAT GCCAGTCGAT TCAAGCCTTT GCGCCTTGGT TGCAGGCATC TCAACTTAAT
CTACTGCGCT ACAATAGCTT AGGTTTTAGC ACCGACTATG GTGTCGATAT GCAGTTGCTT
GGCCGTGCGG GTAAGCCTGT GTATCAGCTA GAGACGGCTG AGTCGCAGTT CCAATTACTG
TCCTCCTTCG ATAGCCAAGT TCAGTGGTCT ATGGTGCGCG AAGCCATTAA TGCCTCTGAT
GCCGAACTAC TCTCACTGGT TGAGGCGTGG CGCTCCGGTG ATGAAACTGC GCTGGATACT
TTGATGCAGG AGCAGCTCGG CGGGGAGGGC GACACCCTGA TGCTGGATAA AATTCTCTGG
CAGCGCAATA AAGTCATGGC CGATGGCATG ATGAGGTTAA TGACCGCAGA AGCCACCAGT
GAACCGCTAT TTGTGGTGGT GGGCGCTGGC CATGTGGTGG GTGATAAAAG CGTGGTGCAA
CTGCTTAAAC AGAAGGGCGC AACCGTAACC GCCTGTTGGC GTGATCAATG TGACTGA
 
Protein sequence
MATSRWRLLL ALCGVAMFTS ASGWAAQTDK PPFYQVQWQG KSAYLLGSIH IGRADFYPMP 
AQVEAAFTKS KGLVVEIDTN KIDSRALLQK YGMATHAQGL DWQSRDKQTI EVMRHYCEDK
ASLCQSIQAF APWLQASQLN LLRYNSLGFS TDYGVDMQLL GRAGKPVYQL ETAESQFQLL
SSFDSQVQWS MVREAINASD AELLSLVEAW RSGDETALDT LMQEQLGGEG DTLMLDKILW
QRNKVMADGM MRLMTAEATS EPLFVVVGAG HVVGDKSVVQ LLKQKGATVT ACWRDQCD