| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0544 |
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| Symbol | |
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| ID | 4476505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 638965 |
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| End bp | 640683 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639725077 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_868190 |
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| Protein GI | 117918998 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAC TACTGATCGA TGATGATGAA GTCGATAGAA CTGCGATTAT TCGGGCACTG
CGACAGTCCA AATTAGCCTT CAATGTGGTT GAGGCAAATT GTGCTTTCGA TGGCCTTAAC
TTGGCTCTCG AAAGGCATTT CGACGGTATT TTGTTGGATT ATCTATTACC CGATGCCAAT
GGTTTAGAGG TGCTGATCAA ACTCAATTCG ATGACTCAAG ACCAAACTGT GGTGGTGATG
CTGAGTCGTT ATGAGGATGA GAAACTGGCG CAGCGTTGTA TTGAGCTGGG CGCGCAGGAT
TTTCTGTTAA AAGATGAAGT CAATTCACGG ATCTTAAGCC GTGCGATTCG TTACGCCAAA
CAACGTTCCT CCATGGCCTT GGCCCTAAGA AATAGCCATC AAAAACTCAA AGAGTTGGCT
GAGCATGATT CTCTAACCAA ATTAGTGAAC CGCTACGGGT TTGAACTGTG CCTAAATCGT
GCCATCGCAA GAGCAAAACG CAGCAATGAC TTTCTTGCAG TTATTTTGCT CGATCTAGAT
GATTTTAAAG CAATTAATGA TACTTTAGGT CATCAAACTG GCGATATCTT ACTCGTCAAA
GTCGCCTCGC GATTAAGCTC AGTGCTGCGA GATGGTGATG TGATCGCCCG CTTAGGTGGG
GATGAGTTTG TAGTACTCGT GACCGACAAT GACTACAAAT ATTTCCCTAT GATAGTCGCC
AATCGCCTGC TTAAGGCCTT TGAGGAGGTT TTCTGCCTGG GTGAAAACGA TGTGATGATT
GGCGCCAGTA TCGGCGTGGC TTTTTATAAT GAGGCCGCCT CCGATAGCTC TGAGTTGATG
AAATGCGCCG ATATTGCCAT GTATCGCGCC AAAAAAATGG GGCGCAACCA AATTCAGTTT
TATTCTGAGG CCTTAGATAA AGAAGTTCGT TACCGTAATC ATATCGAGTC CAGCTTGCGC
ATGGCGCTAA AGCAGAATGA ATTCAAGGTT TATTATCAGG CACAAGTAGA TTCTCAAACC
CATCAAGTGA TAGGGATGGA GGCGTTAATC CGTTGGTTGC ATCCGCAAGA TGGTTTGATT
GCACCGGATC AATTCCTATC CATTGCAGAG GAAATTGGTC TGATGGAAGA AATCGGTGAC
TGGGTGCTTA TCGAAGCCTG TCGTCAAGCG CAGGAATGGC TCACGCGGCT AACCCCCGTT
GGACATAGCT TTACCATTGC GGTGAATTTG TCGGCATCGC AAATTGGACA CATTGATCTA
TATGAAAAAA TTGTCCATGC CCTCGAGGTC ACGGGATTAG ATGCGAAAGC GCTAGAGCTT
GAGATTACCG AAAACAGCTT GATTGAAGAA CCCCATGAAC ATGCCAAGGT GCTCGATAGA
ATTGCGCAAC TTGGAGTACG ATTCGCACTC GATGACTTCG GCACAGGCTT TTCATCCCTA
GAACATATAA AGCTCTTTCC AATCAGTGTA TTAAAAATTG ATAAGAGCTT TATTGCCTCC
TACGATAAGG ATGACAAAGA TACGCGGTTG CTCGCGGCAT TACTCAATTT CGCCTATGGT
TTTAACGTGA CATCGGTTGC CGAAGGCATT GAAACGGCTG AACAAGCCGA GTTTTGCACC
GCACGAAATT GCAATGTGCT CCAAGGGTAT TTATTTTCGC GGCCCTTAGA AGCGAGCGAA
TTTGAGGCCA AGTACATTAC TCCACTACTT ACAAAATAA
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| Protein sequence | MDLLLIDDDE VDRTAIIRAL RQSKLAFNVV EANCAFDGLN LALERHFDGI LLDYLLPDAN
GLEVLIKLNS MTQDQTVVVM LSRYEDEKLA QRCIELGAQD FLLKDEVNSR ILSRAIRYAK
QRSSMALALR NSHQKLKELA EHDSLTKLVN RYGFELCLNR AIARAKRSND FLAVILLDLD
DFKAINDTLG HQTGDILLVK VASRLSSVLR DGDVIARLGG DEFVVLVTDN DYKYFPMIVA
NRLLKAFEEV FCLGENDVMI GASIGVAFYN EAASDSSELM KCADIAMYRA KKMGRNQIQF
YSEALDKEVR YRNHIESSLR MALKQNEFKV YYQAQVDSQT HQVIGMEALI RWLHPQDGLI
APDQFLSIAE EIGLMEEIGD WVLIEACRQA QEWLTRLTPV GHSFTIAVNL SASQIGHIDL
YEKIVHALEV TGLDAKALEL EITENSLIEE PHEHAKVLDR IAQLGVRFAL DDFGTGFSSL
EHIKLFPISV LKIDKSFIAS YDKDDKDTRL LAALLNFAYG FNVTSVAEGI ETAEQAEFCT
ARNCNVLQGY LFSRPLEASE FEAKYITPLL TK
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