| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0542 |
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| Symbol | |
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| ID | 4476503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 636365 |
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| End bp | 638524 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639725075 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_868188 |
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| Protein GI | 117918996 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGG ATAGTTTCCC TGATTCTTTC AACTTCAACA GCTCTAAAAG CTTTTATGCC
AGTGTGATCA GCTCCAGTTG GTTGATGTTA CTCGCCGCCG TCTTTTTTAT GGGGCTCTCT
TGGTATGTGC TTGAAGAATA TTTACGAGAT CGGGGTGATG AGCGTTTTAA CAATAATGTT
CAAGATCTTA TTGGTGCCGT CAGCAGTCGT ATGACTGCCT ATGAGCAGGT ATTACGAGGC
GGCGTAGGAC TATTTCTCGC CTCGGATGGA GTGTCTCGCC GTGAATGGCA ACTCTATGTT
TCTAATGCTC GTTTATCCGA ATATTACCCC GGGATTCAAG GCTTAGGCTT TGCGCAACTC
TTAACGCCTG CAACTGTGGA GGCTTTTACT CAAGAAGTGC AAGAGGAAGG ATTCGATGAC
TATAGAGTGA CCCCTGTTGG GGACAGAGAT CTCTATTGTG CGATTAAGTA CTTAGAACCA
TTTGACTGGC GCAATCAACG GGCATTTGGC TTCGATATGT GCTCCGAATC AACCCGCAGG
GCTGCCATCT TACACGCCAT TGCCACAGGG CTCCCCACCG CATCGGGTAA AGTGACTCTA
GTGCAAGAAA CCCCTGATGA TGCGCAAGCC GGTATTTTAA TGTATGTCCC GTTATACCGC
GGTCAGCCGA TGACGGAGGA AGAACGTAAG CAACAGGCCA TCGGCGTGGT GTACGCCCCA
TTCCGTATGA ATGATCTGAT GCAAGGCATT ATGGGGAAAC GTTTTTCGGG ATTAAAACTG
GCGATTTACG ATGGTATGGA GGCCAACAAC GAGAGCCTGA TGTTTAGCAG CCATAAAGCC
TTGCCCTCTA CAAATGATGT GTTTTATCAA TCCCAGCTAG AAACCATGGA AGGCCAAGTT
TGGCGTTTAG AGGTGTCCTC TGAATCACGC TTTATCTCAA GCGCGGAACA AACCCAAAGT
GTGTGGCTTC AGGTTATTGG GAGTGCGTTT ATCTTAGCCT TGTTTTACTC AGTGCTGACG
ATGGCGCGAA ATCGTTATCA AGAGTCGAGG TTAACCGCAG AGTTAATTGC CAATGAAAAA
CGCTTCCGCC TCGTGATTGA AGCTTCACCT AGTGCGCTCT TTATGGTGGA TAGAAAAGGC
ATTATCACCT TAGTGAACAC CCATGCCGAA CGCCTCTTTG GTTACGCACG GGATGAGTTA
CTCGGGCGTT CAATCAATAT GTTATTACCC GAGGGGTTAA GGGAAATACA TCAGCAACAT
ATGGGCAGTT ACCTCGCCCA ACCGATTGCG AAAAACATGT CACTGCGGGA CGACTTGTTC
GGTTGTTGCA AAGATGGGAC TCGCTTGGCG ATTGAAGTTG GGCTAACACC GATTCACTTC
AGCAATGGCG TGTCGATTCT GGCAACGATA AACAATGTGT CGGAGCGTAA ACGGATCGAA
GCGCAAAGGA TTGAGCATAC GGCTGAACTT GAGCGCATCA ACAAGGAACT CGACCAGTTT
GCTTATATCG CTTCTCACGA TCTTAAGTCG CCACTGCGGG GTATTGAACA GCTAACGAGT
TGGTTAAGTG AAGATTTGTC TGAGAACATG GACGAAAACG TTCAAAAATA CTTAGGGTTA
ATCCAAAGTC GTATCCAACG TATGGTGTTG CTACTCGATG GTTTGCTGAT GTTTTCGCGG
ATTGGGCGAG TCGATGCGGA GATTGTCGAT GTCGATTCAC GGCAACTGAT TGAGGATATG
TTCGCCTTAG TCGCACCGCC GCAGGGCTTT TCCCTCGAGC TCGAAGGAAA TTTCCCACAA
TTTAAAACCG TAAAAACTCT GCTCGAATTA GTGATAAGGA ATTTATTCAG TAATGCGATT
AAACACCATG ATCAGGCTGA AGGTGTGATT AAAGTGGTGT GTAGTGCCTC CAACACCCAT
TACTGGTTTA GTGTTATCGA TGATGGTCCA GGCATATCCA CTAAATACCA TGGCAAGGTA
TTTGAGATGT TCCAAACGCT TAGGCCGAGG GATGAAGTGG AGGGGAGCGG TTTAGGTTTG
TCGCTAGTCA AAAAGACGGT AGAAAGTCTT GGTGGAAAAA TTCAACTAGA ATCAGAGGGA
CGTGGTTGTT GTTTTCGATT TAGCTGGCCG ATGCGCATAG TCAACAAGGA GGGGATATGA
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| Protein sequence | MDKDSFPDSF NFNSSKSFYA SVISSSWLML LAAVFFMGLS WYVLEEYLRD RGDERFNNNV
QDLIGAVSSR MTAYEQVLRG GVGLFLASDG VSRREWQLYV SNARLSEYYP GIQGLGFAQL
LTPATVEAFT QEVQEEGFDD YRVTPVGDRD LYCAIKYLEP FDWRNQRAFG FDMCSESTRR
AAILHAIATG LPTASGKVTL VQETPDDAQA GILMYVPLYR GQPMTEEERK QQAIGVVYAP
FRMNDLMQGI MGKRFSGLKL AIYDGMEANN ESLMFSSHKA LPSTNDVFYQ SQLETMEGQV
WRLEVSSESR FISSAEQTQS VWLQVIGSAF ILALFYSVLT MARNRYQESR LTAELIANEK
RFRLVIEASP SALFMVDRKG IITLVNTHAE RLFGYARDEL LGRSINMLLP EGLREIHQQH
MGSYLAQPIA KNMSLRDDLF GCCKDGTRLA IEVGLTPIHF SNGVSILATI NNVSERKRIE
AQRIEHTAEL ERINKELDQF AYIASHDLKS PLRGIEQLTS WLSEDLSENM DENVQKYLGL
IQSRIQRMVL LLDGLLMFSR IGRVDAEIVD VDSRQLIEDM FALVAPPQGF SLELEGNFPQ
FKTVKTLLEL VIRNLFSNAI KHHDQAEGVI KVVCSASNTH YWFSVIDDGP GISTKYHGKV
FEMFQTLRPR DEVEGSGLGL SLVKKTVESL GGKIQLESEG RGCCFRFSWP MRIVNKEGI
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