Gene Shewana3_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0540 
Symbol 
ID4476501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp634806 
End bp635768 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content47% 
IMG OID639725073 
Producthypothetical protein 
Protein accessionYP_868186 
Protein GI117918994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA TGAGCTATTT GAGTGTGATT GAGCGTTATC ACGAGTATGA GGCCACAGTG 
CATGAGCTGA TGGAGTCTAT TTTAACGGGC ATTGCCGATG CGGACTTATT TCACCAACCA
AAAGTCGATA TCAAGGCCAT GAAGGGTATT GCGGGTAGTT ATCCCTTTGT CGAGCTGATG
TATTTGCTCG ATACCCAAGG GGTGCAAATT AGCCAAAATA TCGCAGTGGT CGATCAGCAG
ATCAAGTTAG TGCCCCTTGG CGGTAATCGC GACCGTAGTC AACGGCCCTA TTTTACCAAT
AGGGATGAGT CTGATGGGGT TAATATCACT CGCCCTTATT TATCCAATGC CAGCGGGAAC
TTATGTTTAT CGGCCTCCTT AGCGATTGTG CAGCAGGAGC AAAAGCTGGG CTATCTAGTC
GTCGATGTGG ATTTGACGCG AATGATTGAA TTTATGATGG GCGACAGTGC TCGTCGGCGG
GTCACACCAG CCTTTAAAGC CGTGTATGGC GTGATAGTCG CAGGGCTTTT TGTGCTGGTG
ATGGTGCTAC TATGGACGGC GCTCAGGGAT ATTTATGGGT TATTTGTGGT GGAGCAAGTC
GGGCAAGACC CATTGCAACC CTTTGGGATC ATTATCTTTA TGACCTTAGC GTTAGCGATC
TTCGACCTCG GGAAAACAAT TCTGGAGGAA GAAGTATTAA TGCATAAGGA TATTTTTCGT
CATAGCTCCA CCCGCCGAAC CATCACTCGC TTTGTATCAA CGATTTTGAT CGCCATTTCA
ATTGAGGCCT TATTGACCAT GTTTAAGGCG TCACTGGGGG AGAAACAATA TATCGAGCCG
GCGATTTGGA TGATGCTTGC TGTAGTGGGT TTATTAGTCG GATTAGGGGC TTATGTGTAT
CTTGGGGCAA AAGCGGAATG GCTGCTGATC AAAACTCAGG CCTATAAGAG TGGCAAAAAG
TAA
 
Protein sequence
MAAMSYLSVI ERYHEYEATV HELMESILTG IADADLFHQP KVDIKAMKGI AGSYPFVELM 
YLLDTQGVQI SQNIAVVDQQ IKLVPLGGNR DRSQRPYFTN RDESDGVNIT RPYLSNASGN
LCLSASLAIV QQEQKLGYLV VDVDLTRMIE FMMGDSARRR VTPAFKAVYG VIVAGLFVLV
MVLLWTALRD IYGLFVVEQV GQDPLQPFGI IIFMTLALAI FDLGKTILEE EVLMHKDIFR
HSSTRRTITR FVSTILIAIS IEALLTMFKA SLGEKQYIEP AIWMMLAVVG LLVGLGAYVY
LGAKAEWLLI KTQAYKSGKK