Gene Shewana3_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0539 
Symbol 
ID4476500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp633170 
End bp634525 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content50% 
IMG OID639725072 
Producthypothetical protein 
Protein accessionYP_868185 
Protein GI117918993 
COG category[S] Function unknown 
COG ID[COG3930] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02421] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGT CGTTAGCCCA GTATCAAGAA GATTTACGCC GCCTTTCCGA TGAGCTTATC 
CGCATCCAAA CGCCGATTAA AATTTTAGAT GCCATCAAAT GGCCACGGGA AATGGAAGAG
CGTTTTCTCT CCAGTAAAGG CACGGTTCTG CCAGCGATTA GCCAAGATTT TTATCAAAAA
ATTGCCTTGC CCTTCGATCC CGTTAAAACT CAAGCCGAGC TGCTTGACCT AAAACAAGAA
ATCCATCGCC GTTTAGGTAA AAAAGACAAG CTGGGTAAGA TCTTAGTTGC TAACGTCGAT
CAATATCGCC TGGTTGTCGA TATGCTAGGC CATCGAGGAA CACCCGTCTT TGGTCAGCTG
AGCCAAGAAC TCTACGGCAG CGCCAGCCAC AGACTACATG GCGATCGCCA CACCCTACGC
CAATTGGGCG ATAAACTCAG CTATATCTTC TCCCTGCCCG CCGCAAGGCA TATGAATAAG
CATCATCCCA AAATCATTAG CGCCCCCGAA GCCGTGAATG TGCTGAGCCA GCGATTGGAA
AAATACTTCC ACAGTGATGA TATGCGGGTG CGCTTGAGTG ACGGGATTGT GTCCGATGCT
GCCGTGGGTG GCGATACGGT CAAACTCAAC AGCAAAGCCA TGTTCAGCGA GTCAGATCTC
AATGTGTACG AAGTCCATGA AGGTTGGGTG CATGTGGGCA CCACCCTCAA TGGCCGTGCT
CAGCCCCATG CTACTTGGCT TAGCGTCGGG TCTCCCCGTG TCGCAGCCAC CCAAGAAGGG
CTTGCCGTGT TACTCGAAAT GCTCACCCTG AGTTCAAACC CAGGTCGTGC CCGCCGGATT
AGCGACCGTG TCGCTGCGGT AGATATGGCG GAAAAGGGGG CGAACTTTAT TGAAGTATTC
AACTATTTTA GGGAATTAAA TCTTAGCGCT AAGGACAGTT ATCGGGTCAC GCAAAGGGTG
TTTCGTGGCG GCATGGTCGA AGGTGGCAGC TTTTTTACCA AAGACATTTC CTATGTGCGC
GGCTATGTCG AAAACATCAA CTTTATCCGC AGCGCCATCA CATCGGGTTT ACCCGAACTG
ATCCCTATGC TGTTTTTAGG CAAGCTGGCC ATCGAAGACA TTCCTGTACT CTATCAAGCT
TGCCAAGAAG GGATTCTCAC GCCACCTAAG TATTTACCGC CGATGTTCGA CAACTTCAGC
GGCCTGTATG CTTGGTTTGG TTTCGCCTCA GGATTAGCAG GAATCGATCT GAAAGGGGTG
CAACGTCACT TCACCCGCTT ATTTAAAGAC GTCCCCAGTA TCGACCCAAG CCTAGAGTTA
CTCGACGACA CTGAATTTGA TAATAACTCA GATTAA
 
Protein sequence
MSESLAQYQE DLRRLSDELI RIQTPIKILD AIKWPREMEE RFLSSKGTVL PAISQDFYQK 
IALPFDPVKT QAELLDLKQE IHRRLGKKDK LGKILVANVD QYRLVVDMLG HRGTPVFGQL
SQELYGSASH RLHGDRHTLR QLGDKLSYIF SLPAARHMNK HHPKIISAPE AVNVLSQRLE
KYFHSDDMRV RLSDGIVSDA AVGGDTVKLN SKAMFSESDL NVYEVHEGWV HVGTTLNGRA
QPHATWLSVG SPRVAATQEG LAVLLEMLTL SSNPGRARRI SDRVAAVDMA EKGANFIEVF
NYFRELNLSA KDSYRVTQRV FRGGMVEGGS FFTKDISYVR GYVENINFIR SAITSGLPEL
IPMLFLGKLA IEDIPVLYQA CQEGILTPPK YLPPMFDNFS GLYAWFGFAS GLAGIDLKGV
QRHFTRLFKD VPSIDPSLEL LDDTEFDNNS D