Gene Shewana3_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0535 
Symbol 
ID4476496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp628904 
End bp630172 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content51% 
IMG OID639725068 
Productmajor facilitator transporter 
Protein accessionYP_868181 
Protein GI117918989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCTG CCAAGCTATT TGAGCAACTG ATGCAATTGC CCGCTGCCGT GCGGCAATAT 
TTGCTGATCA CCTTCAATTA TTGGAGTTTT ACCTTAACCG ATGGTGCGCT GCGGATGTTG
GTGGTGCTGC ATTTTCACGA TCTCGGTTAT ACGCCATTCG CGATTGCGAT GTTGTTCTTG
TTCTATGAGA TTTTTGGTGT CGTGACCAAT CTGGTGGGCG GTTATCTCGG CGCTCGCTTG
GGGCTTAATC GCACTATGAA TCTAGGCCTT GGTATGCAGG TATTGGCATT AGGGATGTTA
TTGGTGCCTG CGGCCAGTTT ACCATTGTGG CTTGCGGGCG TGCCCTGGGT GATGGCGGCG
CAGGCGCTTT CGGGCATTGC TAAAGATCTC AATAAGATGA GCGCAAAAAG CGCGATTAAA
TTGCTGGTTC CAAAGGGGGA GCAGGGCAGG CTTTACCATT GGGTTGCCCT GTTAACCGGG
TCTAAAAATG CCCTTAAAGG GGCGGGATTT TTCCTCGGTG GCGCCTTGCT GGCGGGATTG
GGTTTCAATA TGGCGATTGC CGCCATGATG GCCGTGCTTG CGCTAGTGTG GTTAATGAGC
CTGGTCTTGC TGAAAAAAGA TTTGGGGAAA GCGAAGAACA AACCTAAGTT TACCGAGATT
TTTTCTAAGA GTCGCAGCGT GAATATTCTC TCGGCGGCGC GCCTGTTTTT GTTTGCCGCA
AGGGATGTGT GGTTTGTGGT GGCTTTGCCC GTGTATCTGG CGAGCCAATG GGACTGGGAT
CATTGGGCCG TGGGCGGCTT TTTGGCGCTC TGGGTGATAG CTTACGGCAT AGTGCAAACC
TTAGCTCCGA AGATCACTGG TGCGAGCAGG GCAGAAGCTA ACACTTCGCA GCGCATCCCA
GACGGTTATA CCGCCTTAGT TTGGTCGACA TTATTAGCTT TTGTTCCCGC GTTAATTGCA
CTCAGTTTGT ATCTGGATTT CTCACCACAG CTCAGTCTGA TCTTGGGGCT GATGTTATTT
GGCGGACTGT TTGCGATTAA CTCGTCACTG CACAGCTATT TAATTGTGAG TTACGCCAGT
GAAGAGGCGG TATCCCTCGA TGTTGGGTTC TATTATATGG CTAATGCCAT GGGGCGTTTA
GTGGGAACTG TGCTTTCGGG CTGGGTGTAT CAGAGTTATG GACTGGTGGC CTGTTTGTGG
ATTTCGACGG CCTTTATTGC AATAACGGCA CTGATCTCTA TCAAGCTGCC TCGACAAGTC
AAAGGATAG
 
Protein sequence
MPAAKLFEQL MQLPAAVRQY LLITFNYWSF TLTDGALRML VVLHFHDLGY TPFAIAMLFL 
FYEIFGVVTN LVGGYLGARL GLNRTMNLGL GMQVLALGML LVPAASLPLW LAGVPWVMAA
QALSGIAKDL NKMSAKSAIK LLVPKGEQGR LYHWVALLTG SKNALKGAGF FLGGALLAGL
GFNMAIAAMM AVLALVWLMS LVLLKKDLGK AKNKPKFTEI FSKSRSVNIL SAARLFLFAA
RDVWFVVALP VYLASQWDWD HWAVGGFLAL WVIAYGIVQT LAPKITGASR AEANTSQRIP
DGYTALVWST LLAFVPALIA LSLYLDFSPQ LSLILGLMLF GGLFAINSSL HSYLIVSYAS
EEAVSLDVGF YYMANAMGRL VGTVLSGWVY QSYGLVACLW ISTAFIAITA LISIKLPRQV
KG